Information for 16-CTTGTGGCYASKA (Motif 20)

A G T C A C G T A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A T A G C C A G T C G T A
Reverse Opposite:
A C G T G T A C A T C G A C G T C T A G A C T G A G T C A G T C C G T A G T A C C G T A C G T A C T A G
p-value:1e-8
log p-value:-1.944e+01
Information Content per bp:1.890
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.6 +/- 14.6bp
Average Position of motif in Background53.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTTGTGGCYASKA
GTCTGTGGTTT---
 A C G T A G T C A C G T A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A T A G C C A G T C G T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTTGTGGCYASKA
NNHTGTGGTTWN--
 A C G T A G T C A C G T A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A T A G C C A G T C G T A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTTGTGGCYASKA
RTCATGTGAC-----
 A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A T A G C C A G T C G T A
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTTGTGGCYASKA
-CTGTGGTTTN--
 A G T C A C G T A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A T A G C C A G T C G T A
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTTGTGGCYASKA
NNTGTGGTTT---
 A G T C A C G T A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A T A G C C A G T C G T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.58
Offset:-10
Orientation:forward strand
Alignment:----------CTTGTGGCYASKA
ANAGTGCCACCTGGTGGCCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A T A G C C A G T C G T A
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTTGTGGCYASKA
GCTGTGGTTT---
 A G T C A C G T A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A T A G C C A G T C G T A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.58
Offset:-9
Orientation:reverse strand
Alignment:---------CTTGTGGCYASKA
TAGCGCCCCCTGGTGGCCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A T A G C C A G T C G T A
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTTGTGGCYASKA
GTCATGTGACC----
 A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A T A G C C A G T C G T A
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTTGTGGCYASKA
-CTGTTGCTAGGS
 A G T C A C G T A C G T A C T G A C G T A C T G A C T G A G T C A G T C C G T A T A G C C A G T C G T A
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G