Information for 8-YTAGTWCACG (Motif 26)

A G C T A C G T C T G A A C T G C G A T C G T A A T G C C G T A A G T C A T C G
Reverse Opposite:
A T G C A C T G A C G T T A C G G C A T C G T A G T A C A G C T C G T A C T G A
p-value:1e-7
log p-value:-1.763e+01
Information Content per bp:1.805
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.5 +/- 27.7bp
Average Position of motif in Background91.6 +/- 0.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0168.1_Hnf1b/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----YTAGTWCACG---
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T A C G T A G C T A C G T C T G A A C T G C G A T C G T A A T G C C G T A A G T C A T C G A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-YTAGTWCACG
ACTAGTTAAC-
 A C G T A G C T A C G T C T G A A C T G C G A T C G T A A T G C C G T A A G T C A T C G
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---YTAGTWCACG-
TTATTAGTACATAN
 A C G T A C G T A C G T A G C T A C G T C T G A A C T G C G A T C G T A A T G C C G T A A G T C A T C G A C G T
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:YTAGTWCACG---
-----GCACGTNC
 A G C T A C G T C T G A A C T G C G A T C G T A A T G C C G T A A G T C A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:YTAGTWCACG--
------CACGCA
 A G C T A C G T C T G A A C T G C G A T C G T A A T G C C G T A A G T C A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:YTAGTWCACG---
-----GCACGTAY
 A G C T A C G T C T G A A C T G C G A T C G T A A T G C C G T A A G T C A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

PH0040.1_Hmbox1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----YTAGTWCACG--
GAAAACTAGTTAACATC
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C T G A A C T G C G A T C G T A A T G C C G T A A G T C A T C G A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PB0081.1_Tcf1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---YTAGTWCACG----
NNNTTAGTTAACTNANN
 A C G T A C G T A C G T A G C T A C G T C T G A A C T G C G A T C G T A A T G C C G T A A G T C A T C G A C G T A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---YTAGTWCACG----
NTTTTAGTTAACNNAGN
 A C G T A C G T A C G T A G C T A C G T C T G A A C T G C G A T C G T A A T G C C G T A A G T C A T C G A C G T A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

Arnt/MA0004.1/Jaspar

Match Rank:10
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:YTAGTWCACG--
------CACGTG
 A G C T A C G T C T G A A C T G C G A T C G T A A T G C C G T A A G T C A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G