Information for 12-GTCTGTTTCTGAG (Motif 21)

A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G C G T A C T A G
Reverse Opposite:
A G T C A C G T A G T C C G T A C T A G C G T A C G T A C G T A A G T C G T C A A C T G C G T A A G T C
p-value:1e-8
log p-value:-2.040e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.8 +/- 27.6bp
Average Position of motif in Background92.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GTCTGTTTCTGAG
GGNGCGNCTGTTNNN---
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G C G T A C T A G
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T A C G T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTCTGTTTCTGAG
BRRCVGTTDN----
 A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G C G T A C T A G
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T A C G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTCTGTTTCTGAG
TGTCGGTT------
 A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G C G T A C T A G
C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTCTGTTTCTGAG-
--CTGTTGCTAGGS
 A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G C G T A C T A G A C G T
A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GTCTGTTTCTGAG
NNTNNTGTCTGGNNTNG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G C G T A C T A G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTCTGTTTCTGAG
VBSYGTCTGG-------
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G C G T A C T A G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GTCTGTTTCTGAG
AGTTTCAGTTTC----
 A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G C G T A C T A G
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GTCTGTTTCTGAG
--CTGTTTAC---
 A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G C G T A C T A G
A C G T A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GTCTGTTTCTGAG
CTGTCTGG-------
 A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G C G T A C T A G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GTCTGTTTCTGAG--
TTCTATTTTTAGNNN
 A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G C G T A C T A G A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T