Information for 12-TGACGCACTT (Motif 23)

A C G T A C T G C G T A A T G C A C T G A G T C C G T A A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A C G T A C T G A G T C A T C G A C G T A G T C C G T A
p-value:1e-5
log p-value:-1.337e+01
Information Content per bp:1.964
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets74.2 +/- 22.0bp
Average Position of motif in Background71.4 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TGACGCACTT--
--AAGCACTTAA
 A C G T A C T G C G T A A T G C A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

ISL2/MA0914.1/Jaspar

Match Rank:2
Score:0.68
Offset:4
Orientation:forward strand
Alignment:TGACGCACTT--
----GCACTTAA
 A C G T A C T G C G T A A T G C A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A

Atf1/MA0604.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGACGCACTT
ATGACGTA---
 A C G T A C G T A C T G C G T A A T G C A C T G A G T C C G T A A G T C A C G T A C G T
T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T A C G T A C G T

ATF4/MA0833.1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TGACGCACTT
GGATGATGCAATA
 A C G T A C G T A C G T A C G T A C T G C G T A A T G C A C T G A G T C C G T A A G T C A C G T A C G T
C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGACGCACTT
TGACCTARTT
 A C G T A C T G C G T A A T G C A C T G A G T C C G T A A G T C A C G T A C G T
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGACGCACTT---
TTGACCTANTTATN
 A C G T A C G T A C T G C G T A A T G C A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TGACGCACTT---
---ACCACTTGAA
 A C G T A C T G C G T A A T G C A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

FOSL1/MA0477.1/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGACGCACTT
NATGAGTCACC-
 A C G T A C G T A C G T A C T G C G T A A T G C A C T G A G T C C G T A A G T C A C G T A C G T
A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.66
Offset:4
Orientation:forward strand
Alignment:TGACGCACTT---
----CCACTTGAA
 A C G T A C T G C G T A A T G C A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

FOS::JUN/MA0099.2/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGACGCACTT
TGACTCA---
 A C G T A C T G C G T A A T G C A C T G A G T C C G T A A G T C A C G T A C G T
A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T A C G T