Information for 8-GCATACATATACA (Motif 20)

A C T G A G T C C G T A C G A T C G T A A G T C C G T A A C G T G T C A A C G T C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T C G T A A C G T C G T A A C G T A C T G A C G T C G T A A C G T A C T G G T A C
p-value:1e-8
log p-value:-1.914e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.2 +/- 21.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GCATACATATACA---
-YATGCATATRCATRT
 A C T G A G T C C G T A C G A T C G T A A G T C C G T A A C G T G T C A A C G T C G T A A G T C C G T A A C G T A C G T A C G T
A C G T G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

PB0198.1_Zfp128_2/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GCATACATATACA
NNTATANATATACN
 A C G T A C T G A G T C C G T A C G A T C G T A A G T C C G T A A C G T G T C A A C G T C G T A A G T C C G T A
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCATACATATACA-
CTCATGAATATTCAT
 A C G T A C T G A G T C C G T A C G A T C G T A A G T C C G T A A C G T G T C A A C G T C G T A A G T C C G T A A C G T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

PH0083.1_Irx3_1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCATACATATACA---
AAAATACATGTAATACT
 A C G T A C T G A G T C C G T A C G A T C G T A A G T C C G T A A C G T G T C A A C G T C G T A A G T C C G T A A C G T A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCATACATATACA
--ATGMATATDC-
 A C T G A G T C C G T A C G A T C G T A A G T C C G T A A C G T G T C A A C G T C G T A A G T C C G T A
A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T

PH0085.1_Irx4/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCATACATATACA---
AATATACATGTAAAACA
 A C G T A C T G A G T C C G T A C G A T C G T A A G T C C G T A A C G T G T C A A C G T C G T A A G T C C G T A A C G T A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCATACATATACA---
AATATACATGTAAAATT
 A C G T A C T G A G T C C G T A C G A T C G T A A G T C C G T A A C G T G T C A A C G T C G T A A G T C C G T A A C G T A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PH0082.1_Irx2/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCATACATATACA--
ANTNTTACATGTATNTA
 A C G T A C G T A C T G A G T C C G T A C G A T C G T A A G T C C G T A A C G T G T C A A C G T C G T A A G T C C G T A A C G T A C G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

PH0087.1_Irx6/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCATACATATACA---
AAAATACATGTAAAAAT
 A C G T A C T G A G T C C G T A C G A T C G T A A G T C C G T A A C G T G T C A A C G T C G T A A G T C C G T A A C G T A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

PH0084.1_Irx3_2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCATACATATACA---
AATATACATGTAATATA
 A C G T A C T G A G T C C G T A C G A T C G T A A G T C C G T A A C G T G T C A A C G T C G T A A G T C C G T A A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T