Information for 1-GGKGAAAGAKAAAGGH (Motif 2)

A C T G A C T G A C G T A C T G C G T A G T C A C G T A C T A G C G T A A C G T C G T A C G T A C G T A A C T G A T C G G A C T
Reverse Opposite:
C A G T A T G C A G T C A C G T A C G T A C G T G T A C A C G T A G T C A C G T A C G T A C G T G T A C G T A C G T A C G T A C
p-value:1e-13
log p-value:-3.053e+01
Information Content per bp:1.811
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.2 +/- 31.1bp
Average Position of motif in Background27.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.73
Offset:3
Orientation:forward strand
Alignment:GGKGAAAGAKAAAGGH
---GAAAGTGAAAGT-
 A C T G A C T G A C G T A C T G C G T A G T C A C G T A C T A G C G T A A C G T C G T A C G T A C G T A A C T G A T C G G A C T
A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:GGKGAAAGAKAAAGGH
---GAAAGTGAAAGT-
 A C T G A C T G A C G T A C T G C G T A G T C A C G T A C T A G C G T A A C G T C G T A C G T A C G T A A C T G A T C G G A C T
A C G T A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:3
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GGKGAAAGAKAAAGGH----
--GGAAAGCGAAACCAAAAC
 A C T G A C T G A C G T A C T G C G T A G T C A C G T A C T A G C G T A A C G T C G T A C G T A C G T A A C T G A T C G G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GGKGAAAGAKAAAGGH-
--AGAAAGTGAAAGTGA
 A C T G A C T G A C G T A C T G C G T A G T C A C G T A C T A G C G T A A C G T C G T A C G T A C G T A A C T G A T C G G A C T A C G T
A C G T A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:5
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GGKGAAAGAKAAAGGH
---GAAASYGAAASY-
 A C T G A C T G A C G T A C T G C G T A G T C A C G T A C T A G C G T A A C G T C G T A C G T A C G T A A C T G A T C G G A C T
A C G T A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGKGAAAGAKAAAGGH---
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C T G A C T G A C G T A C T G C G T A G T C A C G T A C T A G C G T A A C G T C G T A C G T A C G T A A C T G A T C G G A C T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GGKGAAAGAKAAAGGH
---GAAACTGAAACT-
 A C T G A C T G A C G T A C T G C G T A G T C A C G T A C T A G C G T A A C G T C G T A C G T A C G T A A C T G A T C G G A C T
A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:GGKGAAAGAKAAAGGH
-----AAAACAAAGG-
 A C T G A C T G A C G T A C T G C G T A G T C A C G T A C T A G C G T A A C G T C G T A C G T A C G T A A C T G A T C G G A C T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:9
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GGKGAAAGAKAAAGGH
---GRAASTGAAAST-
 A C T G A C T G A C G T A C T G C G T A G T C A C G T A C T A G C G T A A C G T C G T A C G T A C G T A A C T G A T C G G A C T
A C G T A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGKGAAAGAKAAAGGH--
--AAACAGACAAAGGAAT
 A C T G A C T G A C G T A C T G C G T A G T C A C G T A C T A G C G T A A C G T C G T A C G T A C G T A A C T G A T C G G A C T A C G T A C G T
A C G T A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T