Information for 4-AGTAAAATACADGTAA (Motif 17)

C G T A C T A G A C G T C G T A C G T A C T G A C G T A C G A T C T G A A T G C C T G A C G T A A T C G C G A T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A T G C G C A T A G C T A T C G A G C T C G T A A C G T A G C T A C G T A C G T G T C A A G T C A C G T
p-value:1e-9
log p-value:-2.130e+01
Information Content per bp:1.806
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.8 +/- 24.2bp
Average Position of motif in Background74.7 +/- 6.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0075.1_Hoxd10/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AGTAAAATACADGTAA
AATGCAATAAAATTTAT----
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T C G T A C G T A C T G A C G T A C G A T C T G A A T G C C T G A C G T A A T C G C G A T C G T A C G T A
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T A C G T A C G T A C G T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AGTAAAATACADGTAA
TAGGTAATAAAATTCA-----
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T C G T A C G T A C T G A C G T A C G A T C T G A A T G C C T G A C G T A A T C G C G A T C G T A C G T A
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AGTAAAATACADGTAA
CTACCAATAAAATTCT-----
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T C G T A C G T A C T G A C G T A C G A T C T G A A T G C C T G A C G T A A T C G C G A T C G T A C G T A
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AGTAAAATACADGTAA
AACCCAATAAAATTCG-----
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T C G T A C G T A C T G A C G T A C G A T C T G A A T G C C T G A C G T A A T C G C G A T C G T A C G T A
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G A C G T A C G T A C G T A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGTAAAATACADGTAA----
---TAAATACATGTAAAATT
 C G T A C T A G A C G T C G T A C G T A C T G A C G T A C G A T C T G A A T G C C T G A C G T A A T C G C G A T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGTAAAATACADGTAA
CCAATAAAAA--------
 A C G T A C G T C G T A C T A G A C G T C G T A C G T A C T G A C G T A C G A T C T G A A T G C C T G A C G T A A T C G C G A T C G T A C G T A
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGTAAAATACADGTAA----
---AAAATACATGTAAAAAT
 C G T A C T A G A C G T C G T A C G T A C T G A C G T A C G A T C T G A A T G C C T G A C G T A A T C G C G A T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGTAAAATACADGTAA
NCYAATAAAA---------
 A C G T A C G T A C G T C G T A C T A G A C G T C G T A C G T A C T G A C G T A C G A T C T G A A T G C C T G A C G T A A T C G C G A T C G T A C G T A
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGTAAAATACADGTAA----
---AATATACATGTAAAACA
 C G T A C T A G A C G T C G T A C G T A C T G A C G T A C G A T C T G A A T G C C T G A C G T A A T C G C G A T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

HOXA13/MA0650.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGTAAAATACADGTAA
CCAATAAAAA--------
 A C G T A C G T C G T A C T A G A C G T C G T A C G T A C T G A C G T A C G A T C T G A A T G C C T G A C G T A A T C G C G A T C G T A C G T A
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T