Information for 3-RSSCTGCCCAGMMCAR (Motif 7)

C T G A A T C G A T G C A G T C A C G T A C T G A G T C G T A C G T A C T G C A A C T G G T A C G T C A A G T C C G T A C T A G
Reverse Opposite:
A G T C A C G T A C T G A C G T A C T G A G T C A C G T C A T G A C T G A C T G G T A C G T C A A C T G A T C G A T G C A G C T
p-value:1e-11
log p-value:-2.697e+01
Information Content per bp:1.838
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.2 +/- 37.0bp
Average Position of motif in Background29.9 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:RSSCTGCCCAGMMCAR
----TGCCCAGNHW--
 C T G A A T C G A T G C A G T C A C G T A C T G A G T C G T A C G T A C T G C A A C T G G T A C G T C A A G T C C G T A C T A G
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:RSSCTGCCCAGMMCAR
---CTGCCCGCA----
 C T G A A T C G A T G C A G T C A C G T A C T G A G T C G T A C G T A C T G C A A C T G G T A C G T C A A G T C C G T A C T A G
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:RSSCTGCCCAGMMCAR
---ATGCCCACC----
 C T G A A T C G A T G C A G T C A C G T A C T G A G T C G T A C G T A C T G C A A C T G G T A C G T C A A G T C C G T A C T A G
A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:RSSCTGCCCAGMMCAR
------CCAGGAACAG
 C T G A A T C G A T G C A G T C A C G T A C T G A G T C G T A C G T A C T G C A A C T G G T A C G T C A A G T C C G T A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:RSSCTGCCCAGMMCAR----
-----TCCCAGMCRAGCCCC
 C T G A A T C G A T G C A G T C A C G T A C T G A G T C G T A C G T A C T G C A A C T G G T A C G T C A A G T C C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-RSSCTGCCCAGMMCAR
GGGTGTGCCCAAAAGG-
 A C G T C T G A A T C G A T G C A G T C A C G T A C T G A G T C G T A C G T A C T G C A A C T G G T A C G T C A A G T C C G T A C T A G
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:RSSCTGCCCAGMMCAR
---TTTCCCAGAAN--
 C T G A A T C G A T G C A G T C A C G T A C T G A G T C G T A C G T A C T G C A A C T G G T A C G T C A A G T C C G T A C T A G
A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:RSSCTGCCCAGMMCAR
--GGTGCCAAGT----
 C T G A A T C G A T G C A G T C A C G T A C T G A G T C G T A C G T A C T G C A A C T G G T A C G T C A A G T C C G T A C T A G
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:RSSCTGCCCAGMMCAR
---TTGCCAAG-----
 C T G A A T C G A T G C A G T C A C G T A C T G A G T C G T A C G T A C T G C A A C T G G T A C G T C A A G T C C G T A C T A G
A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:RSSCTGCCCAGMMCAR
--ATTTCCAAGAA---
 C T G A A T C G A T G C A G T C A C G T A C T G A G T C G T A C G T A C T G C A A C T G G T A C G T C A A G T C C G T A C T A G
A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T