Information for 11-GGAAATTTCC (Motif 31)

A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A G T C A G T C
p-value:1e-5
log p-value:-1.320e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.2 +/- 14.7bp
Average Position of motif in Background57.5 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:GGAAATTTCC
GGGAATTTCC
 A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A G T C A G T C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GGAAATTTCC
GGGAATTTCC
 A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A G T C A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GGAAATTTCC
GGGGATTTCC
 A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A G T C A G T C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGAAATTTCC--
GGGAAATCCCCN
 A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGAAATTTCC
GGGGATTTCC
 A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A G T C A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GGAAATTTCC
NNTGGAAANN---
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A G T C A G T C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------GGAAATTTCC----
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GGAAATTTCC
AATGGAAAAT---
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A G T C A G T C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GGAAATTTCC
NACAGGAAAT----
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A G T C A G T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGAAATTTCC
AATGGAAAAT---
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A G T C A G T C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T