Information for 8-GCGCATGCGT (Motif 27)

C T A G G A T C T C A G A G T C C T G A C G A T T A C G G T A C T A C G A G C T
Reverse Opposite:
C T G A A T G C C A T G A T G C C G T A G A C T C T A G A G T C C T A G A G T C
p-value:1e-7
log p-value:-1.786e+01
Information Content per bp:1.695
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif5.74%
Number of Background Sequences with motif845.9
Percentage of Background Sequences with motif1.76%
Average Position of motif in Targets53.0 +/- 23.9bp
Average Position of motif in Background49.1 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF(NRF)/Promoter/Homer

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GCGCATGCGT
GTGCGCATGCGC
 A C G T A C G T C T A G G A T C T C A G A G T C C T G A C G A T T A C G G T A C T A C G A G C T
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--GCGCATGCGT
CTGCGCATGCGC
 A C G T A C G T C T A G G A T C T C A G A G T C C T G A C G A T T A C G G T A C T A C G A G C T
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GCGCATGCGT
TGCGCAGGCGC
 A C G T C T A G G A T C T C A G A G T C C T G A C G A T T A C G G T A C T A C G A G C T
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GCGCATGCGT-
-----TGCGTG
 C T A G G A T C T C A G A G T C C T G A C G A T T A C G G T A C T A C G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

Hes1/MA1099.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCGCATGCGT
NNCGCGTGNN-
 A C G T C T A G G A T C T C A G A G T C C T G A C G A T T A C G G T A C T A C G A G C T
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GCGCATGCGT----
----TTGCGTGCVA
 C T A G G A T C T C A G A G T C C T G A C G A T T A C G G T A C T A C G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCGCATGCGT-
NNACTTGCCTT
 C T A G G A T C T C A G A G T C C T G A C G A T T A C G G T A C T A C G A G C T A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCGCATGCGT
NGKCACGTGM--
 A C G T A C G T C T A G G A T C T C A G A G T C C T G A C G A T T A C G G T A C T A C G A G C T
T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GCGCATGCGT--
NCANGCGCGCGCGCCA
 A C G T A C G T A C G T A C G T C T A G G A T C T C A G A G T C C T G A C G A T T A C G G T A C T A C G A G C T A C G T A C G T
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCGCATGCGT
GGACGTGC--
 C T A G G A T C T C A G A G T C C T G A C G A T T A C G G T A C T A C G A G C T
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T