p-value: | 1e-9 |
log p-value: | -2.164e+01 |
Information Content per bp: | 1.781 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 1.30% |
Number of Background Sequences with motif | 14.0 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 37.0 +/- 21.0bp |
Average Position of motif in Background | 46.5 +/- 24.4bp |
Strand Bias (log2 ratio + to - strand density) | -0.7 |
Multiplicity (# of sites on avg that occur together) | 1.14 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCTGACTAGTTTC CCAGACAG----- |
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PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer
Match Rank: | 2 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CCTGACTAGTTTC ACCGTGACTAATTNN |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCTGACTAGTTTC CCAGACRSVB--- |
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Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer
Match Rank: | 4 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCTGACTAGTTTC VGCTGWCAVB---- |
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PKNOX2/MA0783.1/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CCTGACTAGTTTC- --TGACAGGTGTCA |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 6 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCTGACTAGTTTC BCAGACWA----- |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CCTGACTAGTTTC GCTGTCAA----- |
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Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer
Match Rank: | 8 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCTGACTAGTTTC TCCCAGMCRAGCCCC |
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HMBOX1/MA0895.1/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CCTGACTAGTTTC- ----ACTAGTTAAC |
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MEIS1/MA0498.2/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCTGACTAGTTTC -TTGACAG----- |
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