Information for 4-ATTGGGAGGTATTCTT (Motif 8)

C T G A A G C T A C G T A C T G T A C G A C T G C G T A A C T G A C T G A C G T C G T A A G C T A C G T A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A C T A G C G T A C T G A A C G T C G T A A G T C A G T C C G A T A G T C A T G C A G T C G T C A C T G A A G C T
p-value:1e-10
log p-value:-2.419e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 18.6bp
Average Position of motif in Background79.9 +/- 2.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATTGGGAGGTATTCTT-
GCTGGGGGGTACCCCTT
 C T G A A G C T A C G T A C T G T A C G A C T G C G T A A C T G A C T G A C G T C G T A A G C T A C G T A G T C A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

PB0167.1_Sox13_2/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATTGGGAGGTATTCTT
GTATTGGGTGGGTAATT-
 A C G T A C G T C T G A A G C T A C G T A C T G T A C G A C T G C G T A A C T G A C T G A C G T C G T A A G C T A C G T A G T C A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:3
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---ATTGGGAGGTATTCTT
TATTATGGGATGGATAA--
 A C G T A C G T A C G T C T G A A G C T A C G T A C T G T A C G A C T G C G T A A C T G A C T G A C G T C G T A A G C T A C G T A G T C A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--ATTGGGAGGTATTCTT
NTATTGACAGGTNNTN--
 A C G T A C G T C T G A A G C T A C G T A C T G T A C G A C T G C G T A A C T G A C T G A C G T C G T A A G C T A C G T A G T C A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--ATTGGGAGGTATTCTT
GTATTGACAGGTNNTT--
 A C G T A C G T C T G A A G C T A C G T A C T G T A C G A C T G C G T A A C T G A C T G A C G T C G T A A G C T A C G T A G T C A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--ATTGGGAGGTATTCTT
GGATTGACAGGTCNTT--
 A C G T A C G T C T G A A G C T A C G T A C T G T A C G A C T G C G T A A C T G A C T G A C G T C G T A A G C T A C G T A G T C A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--ATTGGGAGGTATTCTT
NNATTGACAGGTGCTT--
 A C G T A C G T C T G A A G C T A C G T A C T G T A C G A C T G C G T A A C T G A C T G A C G T C G T A A G C T A C G T A G T C A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T A C G T A C G T

PH0102.1_Meis1/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--ATTGGGAGGTATTCTT
NTATTGACAGCTNNTT--
 A C G T A C G T C T G A A G C T A C G T A C T G T A C G A C T G C G T A A C T G A C T G A C G T C G T A A G C T A C G T A G T C A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T A C G T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:ATTGGGAGGTATTCTT-----
----GTATCTATTGTTCTTTA
 C T G A A G C T A C G T A C T G T A C G A C T G C G T A A C T G A C T G A C G T C G T A A G C T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.50
Offset:7
Orientation:forward strand
Alignment:ATTGGGAGGTATTCTT---
-------GCTATTTTTAGC
 C T G A A G C T A C G T A C T G T A C G A C T G C G T A A C T G A C T G A C G T C G T A A G C T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C