Information for 13-GCAATAAGGTTAC (Motif 29)

A C T G A G T C C G T A C G T A A C G T C G T A C G T A A C T G A C T G A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C G T A C T G A G T C
p-value:1e-5
log p-value:-1.343e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.3 +/- 11.0bp
Average Position of motif in Background53.3 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GCAATAAGGTTAC
-----AAGGTCAC
 A C T G A G T C C G T A C G T A A C G T C G T A C G T A A C T G A C T G A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

PB0197.1_Zfp105_2/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GCAATAAGGTTAC
ATGGTTCAATAATTTTG-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T C G T A C G T A A C T G A C T G A C G T A C G T C G T A A G T C
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCAATAAGGTTAC
-TAATTAAATTA-
 A C T G A G T C C G T A C G T A A C G T C G T A C G T A A C T G A C T G A C G T A C G T C G T A A G T C
A C G T G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A A C G T

RORA/MA0071.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCAATAAGGTTAC
--ATCAAGGTCA-
 A C T G A G T C C G T A C G T A A C G T C G T A C G T A A C T G A C T G A C G T A C G T C G T A A G T C
A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCAATAAGGTTAC
GTAATCDGATTA-
 A C T G A G T C C G T A C G T A A C G T C G T A C G T A A C T G A C T G A C G T A C G T C G T A A G T C
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCAATAAGGTTAC
-TAATTAAATTA-
 A C T G A G T C C G T A C G T A A C G T C G T A C G T A A C T G A C T G A C G T A C G T C G T A A G T C
A C G T G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCAATAAGGTTAC
AAAGGTAATAAAATTT-
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T C G T A C G T A A C T G A C T G A C G T A C G T C G T A A G T C
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCAATAAGGTTAC
-NNATAAGGNN--
 A C T G A G T C C G T A C G T A A C G T C G T A C G T A A C T G A C T G A C G T A C G T C G T A A G T C
A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCAATAAGGTTAC
-GKMTCADRTTWC
 A C T G A G T C C G T A C G T A A C G T C G T A C G T A A C T G A C T G A C G T A C G T C G T A A G T C
A C G T C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCAATAAGGTTAC
--AAYTAGGTCA-
 A C T G A G T C C G T A C G T A A C G T C G T A C G T A A C T G A C T G A C G T A C G T C G T A A G T C
A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T