Information for 7-GGATCTTGCT (Motif 28)

T A C G T C A G C T G A A G C T G A T C A C G T A G C T C T A G T G A C A C G T
Reverse Opposite:
C G T A A C T G A G T C C T G A T G C A C T A G C T G A A G C T A G T C A T G C
p-value:1e-6
log p-value:-1.406e+01
Information Content per bp:1.722
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.55%
Number of Background Sequences with motif219.3
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets51.7 +/- 30.1bp
Average Position of motif in Background52.0 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGATCTTGCT
ACATCCTGNT
 T A C G T C A G C T G A A G C T G A T C A C G T A G C T C T A G T G A C A C G T
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGATCTTGCT------
-NNTCCTGCTGTGNNN
 T A C G T C A G C T G A A G C T G A T C A C G T A G C T C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GGATCTTGCT-
------NGCTN
 T A C G T C A G C T G A A G C T G A T C A C G T A G C T C T A G T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGATCTTGCT----
----CCTGCTGAGH
 T A C G T C A G C T G A A G C T G A T C A C G T A G C T C T A G T G A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

NRL/MA0842.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGATCTTGCT---
--AATTTGCTGAC
 T A C G T C A G C T G A A G C T G A T C A C G T A G C T C T A G T G A C A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGATCTTGCT------
-TNTCCTGCTGTGNNG
 T A C G T C A G C T G A A G C T G A T C A C G T A G C T C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGATCTTGCT----
GGCCYCCTGCTGDGH
 A C G T T A C G T C A G C T G A A G C T G A T C A C G T A G C T C T A G T G A C A C G T A C G T A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGATCTTGCT---
-CCCCCTGCTGTG
 T A C G T C A G C T G A A G C T G A T C A C G T A G C T C T A G T G A C A C G T A C G T A C G T A C G T
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

RHOXF1/MA0719.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGATCTTGCT
NGGATTAN---
 A C G T T A C G T C A G C T G A A G C T G A T C A C G T A G C T C T A G T G A C A C G T
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGATCTTGCT--
NNGCACCTTTCTCC
 A C G T A C G T T A C G T C A G C T G A A G C T G A T C A C G T A G C T C T A G T G A C A C G T A C G T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C