Information for 6-AGTKGSVAGW (Motif 27)

C G T A C A T G G A C T A C G T C T A G A T G C T G C A C G T A C T A G C G A T
Reverse Opposite:
G C T A A G T C A C G T A C G T T A C G G A T C G T C A C T G A G T A C A C G T
p-value:1e-6
log p-value:-1.516e+01
Information Content per bp:1.655
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif8.82%
Number of Background Sequences with motif1869.3
Percentage of Background Sequences with motif3.81%
Average Position of motif in Targets50.3 +/- 24.9bp
Average Position of motif in Background50.4 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGTKGSVAGW---
AGGTGNCAGACAG
 C G T A C A T G G A C T A C G T C T A G A T G C T G C A C G T A C T A G C G A T A C G T A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGTKGSVAGW--
AGGTGHCAGACA
 C G T A C A T G G A C T A C G T C T A G A T G C T G C A C G T A C T A G C G A T A C G T A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGTKGSVAGW-----
NNNNTGCCAGTGATTG
 A C G T C G T A C A T G G A C T A C G T C T A G A T G C T G C A C G T A C T A G C G A T A C G T A C G T A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGTKGSVAGW
ACVAGGAAGT
 C G T A C A T G G A C T A C G T C T A G A T G C T G C A C G T A C T A G C G A T
G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T

PH0113.1_Nkx2-4/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGTKGSVAGW------
AATTTCAAGTGGCTTN
 C G T A C A T G G A C T A C G T C T A G A T G C T G C A C G T A C T A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGTKGSVAGW
-CTTGGCAA-
 C G T A C A T G G A C T A C G T C T A G A T G C T G C A C G T A C T A G C G A T
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AGTKGSVAGW--
---NTCAAGTGG
 C G T A C A T G G A C T A C G T C T A G A T G C T G C A C G T A C T A G C G A T A C G T A C G T
A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AGTKGSVAGW
----NGAAGC
 C G T A C A T G G A C T A C G T C T A G A T G C T G C A C G T A C T A G C G A T
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGTKGSVAGW--
--ATGCCAGACN
 C G T A C A T G G A C T A C G T C T A G A T G C T G C A C G T A C T A G C G A T A C G T A C G T
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGTKGSVAGW
ANCAGGAAGT
 C G T A C A T G G A C T A C G T C T A G A T G C T G C A C G T A C T A G C G A T
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T