Information for 11-TAAYMCRKGAYCT (Motif 25)

A C G T C G T A C G T A A G C T G T C A A G T C C T G A A C T G A C T G C G T A A G C T A G T C A C G T
Reverse Opposite:
C G T A A C T G C T G A A C G T G T A C G T A C A G C T A C T G A C G T C T G A A C G T A C G T C G T A
p-value:1e-6
log p-value:-1.594e+01
Information Content per bp:1.850
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.0 +/- 26.1bp
Average Position of motif in Background64.3 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1/MA0682.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TAAYMCRKGAYCT
TTAATCCC------
 A C G T A C G T C G T A C G T A A G C T G T C A A G T C C T G A A C T G A C T G C G T A A G C T A G T C A C G T
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TAAYMCRKGAYCT
TAATCCCN-----
 A C G T C G T A C G T A A G C T G T C A A G T C C T G A A C T G A C T G C G T A A G C T A G T C A C G T
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAAYMCRKGAYCT
CTTAATCCC------
 A C G T A C G T A C G T C G T A C G T A A G C T G T C A A G T C C T G A A C T G A C T G C G T A A G C T A G T C A C G T
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TAAYMCRKGAYCT
TTAATCCG------
 A C G T A C G T C G T A C G T A A G C T G T C A A G T C C T G A A C T G A C T G C G T A A G C T A G T C A C G T
G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TAAYMCRKGAYCT
TTAATCCT------
 A C G T A C G T C G T A C G T A A G C T G T C A A G T C C T G A A C T G A C T G C G T A A G C T A G T C A C G T
G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TAAYMCRKGAYCT
GCTAATCC-------
 A C G T A C G T A C G T C G T A C G T A A G C T G T C A A G T C C T G A A C T G A C T G C G T A A G C T A G T C A C G T
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TAAYMCRKGAYCT
GCTAATCCCC-----
 A C G T A C G T A C G T C G T A C G T A A G C T G T C A A G T C C T G A A C T G A C T G C G T A A G C T A G T C A C G T
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C A C G T A C G T A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TAAYMCRKGAYCT
YTAATCCY------
 A C G T A C G T C G T A C G T A A G C T G T C A A G T C C T G A A C T G A C T G C G T A A G C T A G T C A C G T
G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TAAYMCRKGAYCT
NYTAATCCYB-----
 A C G T A C G T A C G T C G T A C G T A A G C T G T C A A G T C C T G A A C T G A C T G C G T A A G C T A G T C A C G T
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TAAYMCRKGAYCT
CCTAATCCGC-----
 A C G T A C G T A C G T C G T A C G T A A G C T G T C A A G T C C T G A A C T G A C T G C G T A A G C T A G T C A C G T
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T A C G T A C G T A C G T