Information for 4-ATGCTCTKGC (Motif 20)

C T G A C G A T A C T G T A G C A C G T G T A C A G C T C A T G T C A G A G T C
Reverse Opposite:
A C T G A G T C G T A C C T G A C A T G C G T A A T C G A G T C C G T A A G C T
p-value:1e-8
log p-value:-1.953e+01
Information Content per bp:1.739
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif4.12%
Number of Background Sequences with motif403.5
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets45.0 +/- 28.1bp
Average Position of motif in Background50.1 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATGCTCTKGC---
-GGCTCYAKCAYC
 C T G A C G A T A C T G T A G C A C G T G T A C A G C T C A T G T C A G A G T C A C G T A C G T A C G T
A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ATGCTCTKGC--
--GGTCTGGCAT
 C T G A C G A T A C T G T A G C A C G T G T A C A G C T C A T G T C A G A G T C A C G T A C G T
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATGCTCTKGC--
--GCTCGGSCTC
 C T G A C G A T A C T G T A G C A C G T G T A C A G C T C A T G T C A G A G T C A C G T A C G T
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATGCTCTKGC
-NGCTN----
 C T G A C G A T A C T G T A G C A C G T G T A C A G C T C A T G T C A G A G T C
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ATGCTCTKGC
--GCTCCG--
 C T G A C G A T A C T G T A G C A C G T G T A C A G C T C A T G T C A G A G T C
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ATGCTCTKGC----
--TGTCTGDCACCT
 C T G A C G A T A C T G T A G C A C G T G T A C A G C T C A T G T C A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

POL011.1_XCPE1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ATGCTCTKGC--
--GGTCCCGCCC
 C T G A C G A T A C T G T A G C A C G T G T A C A G C T C A T G T C A G A G T C A C G T A C G T
A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------ATGCTCTKGC-
NNANTGGTGGTCTTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G A T A C T G T A G C A C G T G T A C A G C T C A T G T C A G A G T C A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ATGCTCTKGC-
-TKCTGTTCCA
 C T G A C G A T A C T G T A G C A C G T G T A C A G C T C A T G T C A G A G T C A C G T
A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:ATGCTCTKGC----
--GCTCCGCCCMCY
 C T G A C G A T A C T G T A G C A C G T G T A C A G C T C A T G T C A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T