Information for 1-TTAACTGGCAACA (Motif 2)

A C G T A C G T C G T A C G T A A G T C A C G T A C T G A C T G T A G C C G T A C G T A A G T C C G T A
Reverse Opposite:
C G A T A C T G A C G T A C G T A C T G A G T C A G T C C G T A A C T G A C G T A C G T C G T A G T C A
p-value:1e-12
log p-value:-2.764e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.8 +/- 21.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TTAACTGGCAACA-
CAATCACTGGCAGAAT
 A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T A C T G A C T G T A G C C G T A C G T A A G T C C G T A A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

Myb/MA0100.2/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTAACTGGCAACA
CCAACTGCCA---
 A C G T A C G T C G T A C G T A A G T C A C G T A C T G A C T G T A G C C G T A C G T A A G T C C G T A
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTAACTGGCAACA
TTAAGTGGT----
 A C G T A C G T C G T A C G T A A G T C A C G T A C T G A C T G T A G C C G T A C G T A A G T C C G T A
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTAACTGGCAACA
TTAATTAG-----
 A C G T A C G T C G T A C G T A A G T C A C G T A C T G A C T G T A G C C G T A C G T A A G T C C G T A
C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTAACTGGCAACA
TTAAGTGGN----
 A C G T A C G T C G T A C G T A A G T C A C G T A C T G A C T G T A G C C G T A C G T A A G T C C G T A
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTAACTGGCAACA
CCAACTGCCA---
 A C G T A C G T C G T A C G T A A G T C A C G T A C T G A C T G T A G C C G T A C G T A A G T C C G T A
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTAACTGGCAACA
TGTTKCCTAGCAACM
 A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T A C T G A C T G T A G C C G T A C G T A A G T C C G T A
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

PB0081.1_Tcf1_1/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------TTAACTGGCAACA
ACTTAGTTAACTAAAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T A C T G A C T G T A G C C G T A C G T A A G T C C G T A
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTAACTGGCAACA-
--SCCTAGCAACAG
 A C G T A C G T C G T A C G T A A G T C A C G T A C T G A C T G T A G C C G T A C G T A A G T C C G T A A C G T
A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

ETV2/MA0762.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TTAACTGGCAACA
--AACCGGAAATA
 A C G T A C G T C G T A C G T A A G T C A C G T A C T G A C T G T A G C C G T A C G T A A G T C C G T A
A C G T A C G T C T G A T C G A T A G C T G A C A C T G A C T G C G T A G C T A T C G A A G C T C T G A