Information for 3-AAGACTACAT (Motif 18)

G T C A T G C A T A C G C G T A G A T C A C G T T G C A A T G C C G T A A G C T
Reverse Opposite:
C T G A A C G T T A C G A C G T C G T A C T A G A C G T A T G C A C G T C A G T
p-value:1e-8
log p-value:-2.039e+01
Information Content per bp:1.827
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif152.3
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets57.8 +/- 29.3bp
Average Position of motif in Background48.3 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAGACTACAT--
NWAACCACADNN
 G T C A T G C A T A C G C G T A G A T C A C G T T G C A A T G C C G T A A G C T A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PROX1/MA0794.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAGACTACAT-
CAAGACGCCTTA
 A C G T G T C A T G C A T A C G C G T A G A T C A C G T T G C A A T G C C G T A A G C T A C G T
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

PH0084.1_Irx3_2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAGACTACAT-------
NNTATTACATGTANNNT
 G T C A T G C A T A C G C G T A G A T C A C G T T G C A A T G C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0087.1_Irx6/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAGACTACAT-------
ANTTNTACATGTANTTN
 G T C A T G C A T A C G C G T A G A T C A C G T T G C A A T G C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AAGACTACAT------------
--RACTACAACTCCCAGVAKGC
 G T C A T G C A T A C G C G T A G A T C A C G T T G C A A T G C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

ATF7/MA0834.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAGACTACAT--
CGATGACGTCATCG
 A C G T A C G T G T C A T G C A T A C G C G T A G A T C A C G T T G C A A T G C C G T A A G C T A C G T A C G T
A G T C C T A G T C G A C A G T C A T G C T G A A G T C T C A G C A G T T G A C C T G A A G C T G T A C T C A G

PH0083.1_Irx3_1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AAGACTACAT-------
ANTATTACATGTANNNN
 G T C A T G C A T A C G C G T A G A T C A C G T T G C A A T G C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AAGACTACAT
BCAGACWA---
 A C G T G T C A T G C A T A C G C G T A G A T C A C G T T G C A A T G C C G T A A G C T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AAGACTACAT----
TACGAGACTCCTCTAAC
 A C G T A C G T A C G T G T C A T G C A T A C G C G T A G A T C A C G T T G C A A T G C C G T A A G C T A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAGACTACAT
NAAACCACAG
 G T C A T G C A T A C G C G T A G A T C A C G T T G C A A T G C C G T A A G C T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G