Information for 8-GGYGCTGGGGTAA (Motif 16)

A C T G A T C G A G C T C T A G A G T C C G A T A C T G C T A G A C T G C A T G A C G T G C T A C T G A
Reverse Opposite:
A G C T C A G T C G T A G T A C G T A C G A T C A G T C C G T A T A C G G A T C C T G A A T G C A G T C
p-value:1e-9
log p-value:-2.074e+01
Information Content per bp:1.736
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.3 +/- 24.0bp
Average Position of motif in Background33.9 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGYGCTGGGGTAA
---GCTGTGGTTT
 A C T G A T C G A G C T C T A G A G T C C G A T A C T G C T A G A C T G C A T G A C G T G C T A C T G A
A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

SREBF2/MA0596.1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGYGCTGGGGTAA-
----ATGGGGTGAT
 A C T G A T C G A G C T C T A G A G T C C G A T A C T G C T A G A C T G C A T G A C G T G C T A C T G A A C G T
A C G T A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

PB0118.1_Esrra_2/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGYGCTGGGGTAA-----
-GGCGAGGGGTCAAGGGC
 A C T G A T C G A G C T C T A G A G T C C G A T A C T G C T A G A C T G C A T G A C G T G C T A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGYGCTGGGGTAA-----
-NTNNNGGGGTCANGNNN
 A C T G A T C G A G C T C T A G A G T C C G A T A C T G C T A G A C T G C A T G A C G T G C T A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

SREBF1/MA0595.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GGYGCTGGGGTAA-
----GTGGGGTGAT
 A C T G A T C G A G C T C T A G A G T C C G A T A C T G C T A G A C T G C A T G A C G T G C T A C T G A A C G T
A C G T A C G T A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GGYGCTGGGGTAA-
----CTGTGGTTTN
 A C T G A T C G A G C T C T A G A G T C C G A T A C T G C T A G A C T G C A T G A C G T G C T A C T G A A C G T
A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGYGCTGGGGTAA-----
-CTCCAGGGGTCAATTGA
 A C T G A T C G A G C T C T A G A G T C C G A T A C T G C T A G A C T G C A T G A C G T G C T A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGYGCTGGGGTAA
-----AGRGGTCA
 A C T G A T C G A G C T C T A G A G T C C G A T A C T G C T A G A C T G C A T G A C G T G C T A C T G A
A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGYGCTGGGGTAA-
--NNHTGTGGTTWN
 A C T G A T C G A G C T C T A G A G T C C G A T A C T G C T A G A C T G C A T G A C G T G C T A C T G A A C G T
A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGYGCTGGGGTAA
--GTCTGTGGTTT
 A C T G A T C G A G C T C T A G A G T C C G A T A C T G C T A G A C T G C A T G A C G T G C T A C T G A
A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T