p-value: | 1e-9 |
log p-value: | -2.146e+01 |
Information Content per bp: | 1.804 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.78% |
Number of Background Sequences with motif | 0.6 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 53.6 +/- 35.6bp |
Average Position of motif in Background | 33.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.25 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Arid3b/MA0601.1/Jaspar
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CGGAGATCTTAATACA -----ATATTAATTAA |
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Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer
Match Rank: | 2 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CGGAGATCTTAATACA ---AGGTGTTAAT--- |
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PB0176.1_Sox5_2/Jaspar
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CGGAGATCTTAATACA--- ----TATCATAATTAAGGA |
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PB0079.1_Sry_1/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CGGAGATCTTAATACA- -NANTATTATAATTNNN |
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PB0174.1_Sox30_2/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CGGAGATCTTAATACA- -TAAGATTATAATACGG |
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Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 6 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CGGAGATCTTAATACA ----TATGCWAATBAV |
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PB0064.1_Sox14_1/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CGGAGATCTTAATACA- -NNTAATTATAATTNNN |
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PH0101.1_Lmx1b/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CGGAGATCTTAATACA---- ---AGTTTTTAATTAATTTG |
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POU5F1B/MA0792.1/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CGGAGATCTTAATACA ----TATGCAAAT--- |
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POU3F1/MA0786.1/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CGGAGATCTTAATACA ---TTATGCAAATTA- |
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