Information for 7-TSAAGKGWAKCTG (Motif 13)

A C G T A T G C C G T A C G T A A C T G A C G T A C T G C G A T C G T A A C T G A G T C A C G T A C T G
Reverse Opposite:
G T A C C G T A A C T G G T A C A C G T C G T A A G T C G T C A A G T C A C G T A C G T A T C G C G T A
p-value:1e-9
log p-value:-2.146e+01
Information Content per bp:1.878
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.4 +/- 21.3bp
Average Position of motif in Background26.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TSAAGKGWAKCTG
NTCAAGTGG-----
 A C G T A C G T A T G C C G T A C G T A A C T G A C G T A C T G C G A T C G T A A C T G A G T C A C G T A C T G
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TSAAGKGWAKCTG
NTCAAGTGGN----
 A C G T A C G T A T G C C G T A C G T A A C T G A C G T A C T G C G A T C G T A A C T G A G T C A C G T A C T G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TSAAGKGWAKCTG
AAATTCAAGTGGNTTN-
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G T A A C T G A C G T A C T G C G A T C G T A A C T G A G T C A C G T A C T G
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TSAAGKGWAKCTG
BTBRAGTGSN----
 A C G T A C G T A T G C C G T A C G T A A C T G A C G T A C T G C G A T C G T A A C T G A G T C A C G T A C T G
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TSAAGKGWAKCTG
NANTTTCAAGTGGTTAN-
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G T A A C T G A C G T A C T G C G A T C G T A A C T G A G T C A C G T A C T G
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TSAAGKGWAKCTG-
---AGGGTAACAGC
 A C G T A T G C C G T A C G T A A C T G A C G T A C T G C G A T C G T A A C T G A G T C A C G T A C T G A C G T
A C G T A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TSAAGKGWAKCTG
CGGAAGTGAAAC--
 A C G T A C G T A T G C C G T A C G T A A C T G A C G T A C T G C G A T C G T A A C T G A G T C A C G T A C T G
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TSAAGKGWAKCTG
GGAAGTGAAAST-
 A C G T A T G C C G T A C G T A A C T G A C G T A C T G C G A T C G T A A C T G A G T C A C G T A C T G
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TSAAGKGWAKCTG-----
-NNNNAGCAGCTGCTGAN
 A C G T A T G C C G T A C G T A A C T G A C G T A C T G C G A T C G T A A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

PH0113.1_Nkx2-4/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TSAAGKGWAKCTG
AATTTCAAGTGGCTTN-
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G T A A C T G A C G T A C T G C G A T C G T A A C T G A G T C A C G T A C T G
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A A C G T