Information for 6-AACAAAWWAACAA (Motif 12)

C G T A G T C A A G T C C G T A C T G A C T G A G C T A C G T A C G T A C G T A G T A C C G T A G T C A
Reverse Opposite:
A C G T C G A T A C T G A C G T A C G T C G A T C G A T A G C T A G C T A C G T T C A G A C G T A C G T
p-value:1e-9
log p-value:-2.180e+01
Information Content per bp:1.818
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif136.1
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets43.6 +/- 24.2bp
Average Position of motif in Background54.9 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:AACAAAWWAACAA--
---AAACAAACATTC
 C G T A G T C A A G T C C G T A C T G A C T G A G C T A C G T A C G T A C G T A G T A C C G T A G T C A A C G T A C G T
A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AACAAAWWAACAA---
-AACAAACAACAAGAG
 C G T A G T C A A G T C C G T A C T G A C T G A G C T A C G T A C G T A C G T A G T A C C G T A G T C A A C G T A C G T A C G T
A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0119.1_Foxa2_2/Jaspar

Match Rank:3
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AACAAAWWAACAA----
--AAAAATAACAAACGG
 C G T A G T C A A G T C C G T A C T G A C T G A G C T A C G T A C G T A C G T A G T A C C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:AACAAAWWAACAA
---AAATAAACA-
 C G T A G T C A A G T C C G T A C T G A C T G A G C T A C G T A C G T A C G T A G T A C C G T A G T C A
A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AACAAAWWAACAA--
CAAAAGTAAACAAAG
 C G T A G T C A A G T C C G T A C T G A C T G A G C T A C G T A C G T A C G T A G T A C C G T A G T C A A C G T A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

Foxq1/MA0040.1/Jaspar

Match Rank:6
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:AACAAAWWAACAA--
----AATAAACAATN
 C G T A G T C A A G T C C G T A C T G A C T G A G C T A C G T A C G T A C G T A G T A C C G T A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

FOXC2/MA0846.1/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AACAAAWWAACAA-
--TAAGTAAACAAA
 C G T A G T C A A G T C C G T A C T G A C T G A G C T A C G T A C G T A C G T A G T A C C G T A G T C A A C G T
A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

Foxj3/MA0851.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AACAAAWWAACAA----
AAAAAGTAAACAAACAC
 C G T A G T C A A G T C C G T A C T G A C T G A G C T A C G T A C G T A C G T A G T A C C G T A G T C A A C G T A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AACAAAWWAACAA----
AAAAAGTAAACAAACAC
 C G T A G T C A A G T C C G T A C T G A C T G A G C T A C G T A C G T A C G T A G T A C C G T A G T C A A C G T A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0123.1_Foxl1_2/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AACAAAWWAACAA----
-ATATCAAAACAAAACA
 C G T A G T C A A G T C C G T A C T G A C T G A G C T A C G T A C G T A C G T A G T A C C G T A G T C A A C G T A C G T A C G T A C G T
A C G T G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A