Information for 5-AATGGGGGATTCGCAC (Motif 10)

C G T A C G T A C G A T C T A G A T C G A C T G A C T G C T A G C G T A A C G T A C G T A G T C A C T G A T G C C G T A G T A C
Reverse Opposite:
A C T G A C G T A T C G A G T C T C A G C G T A C G T A A C G T A G T C A G T C G T A C T A G C A G T C C G T A A C G T A C G T
p-value:1e-9
log p-value:-2.217e+01
Information Content per bp:1.885
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.0 +/- 26.8bp
Average Position of motif in Background47.3 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AATGGGGGATTCGCAC
----GGGGATTCCCCC
 C G T A C G T A C G A T C T A G A T C G A C T G A C T G C T A G C G T A A C G T A C G T A G T C A C T G A T G C C G T A G T A C
A C G T A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

PH0139.1_Pitx3/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AATGGGGGATTCGCAC--
--AGGGGGATTAGCTGCC
 C G T A C G T A C G A T C T A G A T C G A C T G A C T G C T A G C G T A A C G T A C G T A G T C A C T G A T G C C G T A G T A C A C G T A C G T
A C G T A C G T T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AATGGGGGATTCGCAC
TAATGGCGGNC------
 A C G T C G T A C G T A C G A T C T A G A T C G A C T G A C T G C T A G C G T A A C G T A C G T A G T C A C T G A T G C C G T A G T A C
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PH0123.1_Obox3/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AATGGGGGATTCGCAC-
TGAGGGGGATTAACTAT
 C G T A C G T A C G A T C T A G A T C G A C T G A C T G C T A G C G T A A C G T A C G T A G T C A C T G A T G C C G T A G T A C A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

PB0201.1_Zfp281_2/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AATGGGGGATTCGCAC
NNNATTGGGGGTNTCCT--
 A C G T A C G T A C G T C G T A C G T A C G A T C T A G A T C G A C T G A C T G C T A G C G T A A C G T A C G T A G T C A C T G A T G C C G T A G T A C
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AATGGGGGATTCGCAC
----GGGGATTTCC--
 C G T A C G T A C G A T C T A G A T C G A C T G A C T G C T A G C G T A A C G T A C G T A G T C A C T G A T G C C G T A G T A C
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AATGGGGGATTCGCAC
--NGGGGATTTCCC--
 C G T A C G T A C G A T C T A G A T C G A C T G A C T G C T A G C G T A A C G T A C G T A G T C A C T G A T G C C G T A G T A C
A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AATGGGGGATTCGCAC
----NNGGATTAGN--
 C G T A C G T A C G A T C T A G A T C G A C T G A C T G C T A G C G T A A C G T A C G T A G T C A C T G A T G C C G T A G T A C
A C G T A C G T A C G T A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T

PH0122.1_Obox2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AATGGGGGATTCGCAC-
TGAGGGGGATTAACTAT
 C G T A C G T A C G A T C T A G A T C G A C T G A C T G C T A G C G T A A C G T A C G T A G T C A C T G A T G C C G T A G T A C A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

PB0128.1_Gcm1_2/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----AATGGGGGATTCGCAC
TGCGCATAGGGGAGGAG---
 A C G T A C G T A C G T A C G T C G T A C G T A C G A T C T A G A T C G A C T G A C T G C T A G C G T A A C G T A C G T A G T C A C T G A T G C C G T A G T A C
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G A C G T A C G T A C G T