Information for 4-ACACAGTGGATCT (Motif 5)

C T G A A G T C C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A G C T
Reverse Opposite:
C T G A C T A G G T C A C G A T G T A C A G T C C G T A G T A C A C G T A C T G C G A T A C T G A G C T
p-value:1e-15
log p-value:-3.524e+01
Information Content per bp:1.836
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.9 +/- 28.8bp
Average Position of motif in Background55.2 +/- 8.1bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ACACAGTGGATCT
CTCACACAATGGCGC-
 A C G T A C G T A C G T C T G A A G T C C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A G C T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACACAGTGGATCT-
GHTACAWTGTADCHR
 A C G T C T G A A G T C C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A G C T A C G T
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACACAGTGGATCT-
GHWACAWTGTWDCWA
 A C G T C T G A A G T C C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A G C T A C G T
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:ACACAGTGGATCT
-----GTGGAT--
 C T G A A G T C C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ACACAGTGGATCT
-TTRAGTGSYK--
 C T G A A G T C C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A G C T
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ACACAGTGGATCT
-CCGATTGGCT--
 C T G A A G T C C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A G C T
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

Ar/MA0007.3/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----ACACAGTGGATCT
NGGTACACNGTGTTCCC
 A C G T A C G T A C G T A C G T C T G A A G T C C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A G C T
C T A G C T A G C T A G G C A T C G T A T A G C C T G A A G T C A T G C T C A G A G C T A T C G A C G T C G A T G A T C G A T C G A T C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ACACAGTGGATCT
VRAACAATGG----
 A C G T C T G A A G T C C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A G C T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ACACAGTGGATCT---
-CTGATTGGTCNATTT
 C T G A A G T C C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A G C T A C G T A C G T A C G T
A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

Sox17/MA0078.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ACACAGTGGATCT
-GACAATGNN---
 C T G A A G T C C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A G C T
A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T