Information for 16-GATTGGCAST (Motif 47)

T C A G G T C A A G C T A C G T T A C G A C T G T A G C T G C A A T G C G C A T
Reverse Opposite:
C G T A T A C G A C G T A T C G G T A C A T G C C G T A C T G A C A G T A G T C
p-value:1e-7
log p-value:-1.654e+01
Information Content per bp:1.734
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif46.4
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets58.7 +/- 25.3bp
Average Position of motif in Background55.9 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:GATTGGCAST
NNTTGGCANN
 T C A G G T C A A G C T A C G T T A C G A C T G T A G C T G C A A T G C G C A T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.79
Offset:2
Orientation:forward strand
Alignment:GATTGGCAST
--TTGGCA--
 T C A G G T C A A G C T A C G T T A C G A C T G T A G C T G C A A T G C G C A T
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:GATTGGCAST
-NTTGGCANN
 T C A G G T C A A G C T A C G T T A C G A C T G T A G C T G C A A T G C G C A T
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGCAST
CCGATTGGCT--
 A C G T A C G T T C A G G T C A A G C T A C G T T A C G A C T G T A G C T G C A A T G C G C A T
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GATTGGCAST
GGTTGGCAT-
 T C A G G T C A A G C T A C G T T A C G A C T G T A G C T G C A A T G C G C A T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGCAST
BTGABTGACAGS
 A C G T A C G T T C A G G T C A A G C T A C G T T A C G A C T G T A G C T G C A A T G C G C A T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

NFYB/MA0502.1/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGCAST---
CTGATTGGTCNATTT
 A C G T A C G T T C A G G T C A A G C T A C G T T A C G A C T G T A G C T G C A A T G C G C A T A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GATTGGCAST--
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T T C A G G T C A A G C T A C G T T A C G A C T G T A G C T G C A A T G C G C A T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GATTGGCAST
NTGATTGACAGN
 A C G T A C G T T C A G G T C A A G C T A C G T T A C G A C T G T A G C T G C A A T G C G C A T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GATTGGCAST
-CTTGGCAA-
 T C A G G T C A A G C T A C G T T A C G A C T G T A G C T G C A A T G C G C A T
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T