Information for 21-CTGGARAGYTCCA (Motif 45)

T A G C C A G T A C T G A T C G C T G A C T G A G T C A T A C G A G C T A G C T A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G T C A G T C G A C T G A A T G C C A G T G A C T A G C T A T G C A G T C G T C A A T C G
p-value:1e-7
log p-value:-1.748e+01
Information Content per bp:1.672
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.02%
Number of Background Sequences with motif333.9
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets49.5 +/- 28.3bp
Average Position of motif in Background47.6 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CTGGARAGYTCCA
--GGAAATCCCC-
 T A G C C A G T A C T G A T C G C T G A C T G A G T C A T A C G A G C T A G C T A G T C A G T C C G T A
A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CTGGARAGYTCCA
-GGGAAATCCCCN
 T A G C C A G T A C T G A T C G C T G A C T G A G T C A T A C G A G C T A G C T A G T C A G T C C G T A
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CTGGARAGYTCCA
--GGAAATTCCC-
 T A G C C A G T A C T G A T C G C T G A C T G A G T C A T A C G A G C T A G C T A G T C A G T C C G T A
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.71
Offset:2
Orientation:forward strand
Alignment:CTGGARAGYTCCA
--GGAAATTCCC-
 T A G C C A G T A C T G A T C G C T G A C T G A G T C A T A C G A G C T A G C T A G T C A G T C C G T A
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CTGGARAGYTCCA
--GGAAANCCCC-
 T A G C C A G T A C T G A T C G C T G A C T G A G T C A T A C G A G C T A G C T A G T C A G T C C G T A
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTGGARAGYTCCA-----
TTCTAGAANNTTCCAGAANN
 A C G T A C G T T A G C C A G T A C T G A T C G C T G A C T G A G T C A T A C G A G C T A G C T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

PB0201.1_Zfp281_2/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGGARAGYTCCA-----
-AGGAGACCCCCAATTTG
 T A G C C A G T A C T G A T C G C T G A C T G A G T C A T A C G A G C T A G C T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGGARAGYTCCA
-TGGAAAA-----
 T A G C C A G T A C T G A T C G C T G A C T G A G T C A T A C G A G C T A G C T A G T C A G T C C G T A
A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGGARAGYTCCA
NNTGGAAANN----
 A C G T T A G C C A G T A C T G A T C G C T G A C T G A G T C A T A C G A G C T A G C T A G T C A G T C C G T A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTGGARAGYTCCA
GGGGGAATCCCC-
 T A G C C A G T A C T G A T C G C T G A C T G A G T C A T A C G A G C T A G C T A G T C A G T C C G T A
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T