Information for 20-GAAATWATATKTW (Motif 42)

A C T G C G T A C G T A C G T A A C G T C G T A C G T A C G A T C T G A A C G T A C G T A C G T C G A T
Reverse Opposite:
C G T A C G T A T G A C C G T A A G C T C G T A A C G T C G A T C G T A A C G T A C G T A C G T A G T C
p-value:1e-8
log p-value:-1.876e+01
Information Content per bp:1.889
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.6 +/- 23.5bp
Average Position of motif in Background46.6 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0046.1_Hoxa10/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GAAATWATATKTW
TAGGTAATAAAATTCA
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A C G T A C G A T C T G A A C G T A C G T A C G T C G A T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GAAATWATATKTW
--AAGGATATNTN
 A C T G C G T A C G T A C G T A A C G T C G T A C G T A C G A T C T G A A C G T A C G T A C G T C G A T
A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

PH0037.1_Hdx/Jaspar

Match Rank:3
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GAAATWATATKTW
AAGGCGAAATCATCGCA-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A C G T A C G A T C T G A A C G T A C G T A C G T C G A T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAAATWATATKTW--
GCTAATTATAATTATC
 A C G T A C T G C G T A C G T A C G T A A C G T C G T A C G T A C G A T C T G A A C G T A C G T A C G T C G A T A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PH0022.1_Dlx3/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GAAATWATATKTW
NNNGGTAATTATNGNGN
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A C G T A C G A T C T G A A C G T A C G T A C G T C G A T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

MF0010.1_Homeobox_class/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAAATWATATKTW
--AATAATT----
 A C T G C G T A C G T A C G T A A C G T C G T A C G T A C G A T C T G A A C G T A C G T A C G T C G A T
A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAAATWATATKTW-
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A C G T A C G A T C T G A A C G T A C G T A C G T C G A T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GAAATWATATKTW
TACTGGAAAAAAAA----
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A C G T A C G A T C T G A A C G T A C G T A C G T C G A T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAAATWATATKTW
NTAATTAATAT---
 A C G T A C T G C G T A C G T A C G T A A C G T C G T A C G T A C G A T C T G A A C G T A C G T A C G T C G A T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GAAATWATATKTW
AAAGGTAATAAAATTT-
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A C G T A C G A T C T G A A C G T A C G T A C G T C G A T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T A C G T