Information for 18-AATGAAACTTCAA (Motif 39)

T C G A T C G A G C A T C T A G T G C A G T C A T G C A A G T C G C A T C A G T G A T C G T C A G C T A
Reverse Opposite:
C G A T C A G T C T A G G T C A C G T A C T A G A C G T C A G T A C G T A G T C C G T A A G C T A C G T
p-value:1e-8
log p-value:-1.987e+01
Information Content per bp:1.536
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 26.0bp
Average Position of motif in Background8.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AATGAAACTTCAA
TTGAATGAAATTCGA-
 A C G T A C G T A C G T T C G A T C G A G C A T C T A G T G C A G T C A T G C A A G T C G C A T C A G T G A T C G T C A G C T A
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AATGAAACTTCAA
GAAAMTGAAACT----
 A C G T A C G T A C G T T C G A T C G A G C A T C T A G T G C A G T C A T G C A A G T C G C A T C A G T G A T C G T C A G C T A
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AATGAAACTTCAA
GGAAANTGAAACTNA--
 A C G T A C G T A C G T A C G T T C G A T C G A G C A T C T A G T G C A G T C A T G C A A G T C G C A T C A G T G A T C G T C A G C T A
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AATGAAACTTCAA
ACTGAAACCA---
 T C G A T C G A G C A T C T A G T G C A G T C A T G C A A G T C G C A T C A G T G A T C G T C A G C T A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AATGAAACTTCAA
GAAACTGAAACT----
 A C G T A C G T A C G T T C G A T C G A G C A T C T A G T G C A G T C A T G C A A G T C G C A T C A G T G A T C G T C A G C T A
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AATGAAACTTCAA
GGAAGTGAAAST----
 A C G T A C G T A C G T T C G A T C G A G C A T C T A G T G C A G T C A T G C A A G T C G C A T C A G T G A T C G T C A G C T A
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AATGAAACTTCAA------
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T T C G A T C G A G C A T C T A G T G C A G T C A T G C A A G T C G C A T C A G T G A T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AATGAAACTTCAA
AGAAACGAAAGT----
 A C G T A C G T A C G T T C G A T C G A G C A T C T A G T G C A G T C A T G C A A G T C G C A T C A G T G A T C G T C A G C T A
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AATGAAACTTCAA
GAAAGTGAAAGT----
 A C G T A C G T A C G T T C G A T C G A G C A T C T A G T G C A G T C A T G C A A G T C G C A T C A G T G A T C G T C A G C T A
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AATGAAACTTCAA
GRAASTGAAAST----
 A C G T A C G T A C G T T C G A T C G A G C A T C T A G T G C A G T C A T G C A A G T C G C A T C A G T G A T C G T C A G C T A
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T A C G T