Information for 15-AAGTTTASAATCA (Motif 38)

C G T A C G T A A C T G C A G T A C G T C G A T C T G A T A G C C G T A C G T A G A C T A G T C C G T A
Reverse Opposite:
C G A T C T A G C T G A A C G T A C G T A T C G A G C T C G T A C G T A G T C A G T A C C G A T C G A T
p-value:1e-8
log p-value:-1.987e+01
Information Content per bp:1.754
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.5 +/- 24.4bp
Average Position of motif in Background86.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AAGTTTASAATCA-----
-AAGGCGAAATCATCGCA
 C G T A C G T A A C T G C A G T A C G T C G A T C T G A T A G C C G T A C G T A G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.65
Offset:6
Orientation:forward strand
Alignment:AAGTTTASAATCA-
------CCAATCAA
 C G T A C G T A A C T G C A G T A C G T C G A T C T G A T A G C C G T A C G T A G A C T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AAGTTTASAATCA-
NNAGATNVNWATCTN
 A C G T C G T A C G T A A C T G C A G T A C G T C G A T C T G A T A G C C G T A C G T A G A C T A G T C C G T A A C G T
C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AAGTTTASAATCA
---ATTTGAATT-
 C G T A C G T A A C T G C A G T A C G T C G A T C T G A T A G C C G T A C G T A G A C T A G T C C G T A
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:5
Score:0.61
Offset:6
Orientation:forward strand
Alignment:AAGTTTASAATCA---
------CAAATCACTG
 C G T A C G T A A C T G C A G T A C G T C G A T C T G A T A G C C G T A C G T A G A C T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAGTTTASAATCA
ANATTTTTGCAANTN
 A C G T A C G T C G T A C G T A A C T G C A G T A C G T C G A T C T G A T A G C C G T A C G T A G A C T A G T C C G T A
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PB0079.1_Sry_1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAGTTTASAATCA--
NANTATTATAATTNNN
 A C G T C G T A C G T A A C T G C A G T A C G T C G A T C T G A T A G C C G T A C G T A G A C T A G T C C G T A A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0174.1_Sox30_2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAGTTTASAATCA--
TAAGATTATAATACGG
 A C G T C G T A C G T A A C T G C A G T A C G T C G A T C T G A T A G C C G T A C G T A G A C T A G T C C G T A A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

CEBPA/MA0102.3/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAGTTTASAATCA
NATTGTGCAAT--
 C G T A C G T A A C T G C A G T A C G T C G A T C T G A T A G C C G T A C G T A G A C T A G T C C G T A
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAGTTTASAATCA-----
NTAATTDGCYAATTANNWWD
 A C G T A C G T C G T A C G T A A C T G C A G T A C G T C G A T C T G A T A G C C G T A C G T A G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A