Information for 12-TTTGACCAAT (Motif 37)

A C G T A C G T C G A T A C T G C G T A A G T C A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G A C T G A C G T A G T C C G T A C G T A C G T A
p-value:1e-8
log p-value:-1.987e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.2 +/- 19.0bp
Average Position of motif in Background47.9 +/- 4.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TTTGACCAAT---
AAATGGACCAATCAG
 A C G T A C G T A C G T A C G T C G A T A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TTTGACCAAT--
ACTAGCCAATCA
 A C G T A C G T C G A T A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C G T A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TTTGACCAAT---
---AGCCAATCGG
 A C G T A C G T C G A T A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TTTGACCAAT-----
TTTAGAACAATAAAAT
 A C G T A C G T A C G T C G A T A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

NFYA/MA0060.2/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTTGACCAAT---------
-TGGACCAATCAGCACTCT
 A C G T A C G T C G A T A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

PB0062.1_Sox12_1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTTGACCAAT--
NTTNAGAACAATTA
 A C G T A C G T A C G T A C G T C G A T A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C G T A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTTGACCAAT----
NNTNANAACAATTNNA
 A C G T A C G T A C G T A C G T C G A T A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0063.1_Sox13_1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTTGACCAAT-----
TTAAGAACAATAAATT
 A C G T A C G T A C G T C G A T A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTTGACCAAT
GTTGCGCAAT
 A C G T A C G T C G A T A C T G C G T A A G T C A G T C C G T A C G T A A C G T
T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTTGACCAAT------
TAGTGAACAATAGATTT
 A C G T A C G T A C G T C G A T A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T