Information for 2-CTRTMAAATAAAAACA (Motif 3)

G T A C A G C T C T A G C A G T G T A C G T C A C G T A C G T A C A G T C G T A C G T A C G T A C T G A G T C A G T A C C G T A
Reverse Opposite:
A C G T A C T G A C G T G A C T C G A T A C G T A C G T G T C A A C G T A C G T A C G T A C G T G T C A A G C T C T G A A C T G
p-value:1e-19
log p-value:-4.415e+01
Information Content per bp:1.756
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.2 +/- 20.3bp
Average Position of motif in Background83.8 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0093.1_Zfp105_1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CTRTMAAATAAAAACA-
--AACAAACAACAAGAG
 G T A C A G C T C T A G C A G T G T A C G T C A C G T A C G T A C A G T C G T A C G T A C G T A C T G A G T C A G T A C C G T A A C G T
A C G T A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CTRTMAAATAAAAACA---
----CAAACAACAACACCT
 G T A C A G C T C T A G C A G T G T A C G T C A C G T A C G T A C A G T C G T A C G T A C G T A C T G A G T C A G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

HOXA13/MA0650.1/Jaspar

Match Rank:3
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CTRTMAAATAAAAACA
----CCAATAAAAA--
 G T A C A G C T C T A G C A G T G T A C G T C A C G T A C G T A C A G T C G T A C G T A C G T A C T G A G T C A G T A C C G T A
A C G T A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:4
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CTRTMAAATAAAAACA
----CCAATAAAAC--
 G T A C A G C T C T A G C A G T G T A C G T C A C G T A C G T A C A G T C G T A C G T A C G T A C T G A G T C A G T A C C G T A
A C G T A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTRTMAAATAAAAACA-
GTTAAAAAAAAAAATTA
 G T A C A G C T C T A G C A G T G T A C G T C A C G T A C G T A C A G T C G T A C G T A C G T A C T G A G T C A G T A C C G T A A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CTRTMAAATAAAAACA
----CCAATAAAAA--
 G T A C A G C T C T A G C A G T G T A C G T C A C G T A C G T A C A G T C G T A C G T A C G T A C T G A G T C A G T A C C G T A
A C G T A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTRTMAAATAAAAACA--
-GTTCAAAAAAAAAATTC
 G T A C A G C T C T A G C A G T G T A C G T C A C G T A C G T A C A G T C G T A C G T A C G T A C T G A G T C A G T A C C G T A A C G T A C G T
A C G T C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTRTMAAATAAAAACA-
-CTACCAATAAAATTCT
 G T A C A G C T C T A G C A G T G T A C G T C A C G T A C G T A C A G T C G T A C G T A C G T A C T G A G T C A G T A C C G T A A C G T
A C G T G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

PH0057.1_Hoxb13/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTRTMAAATAAAAACA-
-AACCCAATAAAATTCG
 G T A C A G C T C T A G C A G T G T A C G T C A C G T A C G T A C A G T C G T A C G T A C G T A C T G A G T C A G T A C C G T A A C G T
A C G T T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTRTMAAATAAAAACA
---NCYAATAAAA---
 G T A C A G C T C T A G C A G T G T A C G T C A C G T A C G T A C A G T C G T A C G T A C G T A C T G A G T C A G T A C C G T A
A C G T A C G T A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T