Information for 11-CCTCTGCCAGGACCTG (Motif 17)

G T A C G T A C A C G T A G T C A C G T A C T G G A T C G T A C C G T A C T A G A T C G T G C A A G T C A G T C A C G T C A T G
Reverse Opposite:
G A T C C G T A A C T G A C T G A C G T A T G C A G T C A C G T A C T G C T A G G T A C G T C A A C T G T G C A A C T G A C T G
p-value:1e-11
log p-value:-2.653e+01
Information Content per bp:1.782
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif9.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets33.3 +/- 21.1bp
Average Position of motif in Background49.3 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCTCTGCCAGGACCTG
---TTGCCAAG-----
 G T A C G T A C A C G T A G T C A C G T A C T G G A T C G T A C C G T A C T A G A T C G T G C A A G T C A G T C A C G T C A T G
A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCTCTGCCAGGACCTG
--SCTGTCARCACC--
 G T A C G T A C A C G T A G T C A C G T A C T G G A T C G T A C C G T A C T A G A T C G T G C A A G T C A G T C A C G T C A T G
A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:CCTCTGCCAGGACCTG--
---------NCACCTGTN
 G T A C G T A C A C G T A G T C A C G T A C T G G A T C G T A C C G T A C T A G A T C G T G C A A G T C A G T C A C G T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

TCF3/MA0522.2/Jaspar

Match Rank:4
Score:0.53
Offset:8
Orientation:forward strand
Alignment:CCTCTGCCAGGACCTG--
--------AACACCTGCT
 G T A C G T A C A C G T A G T C A C G T A C T G G A T C G T A C C G T A C T A G A T C G T G C A A G T C A G T C A C G T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

TCF4/MA0830.1/Jaspar

Match Rank:5
Score:0.52
Offset:8
Orientation:forward strand
Alignment:CCTCTGCCAGGACCTG--
--------CGCACCTGCT
 G T A C G T A C A C G T A G T C A C G T A C T G G A T C G T A C C G T A C T A G A T C G T G C A A G T C A G T C A C G T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CCTCTGCCAGGACCTG
--GGGGCCGAGGCCTG
 G T A C G T A C A C G T A G T C A C G T A C T G G A T C G T A C C G T A C T A G A T C G T G C A A G T C A G T C A C G T C A T G
A C G T A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

Klf12/MA0742.1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CCTCTGCCAGGACCTG---
----GACCACGCCCTTATT
 G T A C G T A C A C G T A G T C A C G T A C T G G A T C G T A C C G T A C T A G A T C G T G C A A G T C A G T C A C G T C A T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.51
Offset:7
Orientation:forward strand
Alignment:CCTCTGCCAGGACCTG---
-------SNGCACCTGCHS
 G T A C G T A C A C G T A G T C A C G T A C T G G A T C G T A C C G T A C T A G A T C G T G C A A G T C A G T C A C G T C A T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.51
Offset:8
Orientation:forward strand
Alignment:CCTCTGCCAGGACCTG--
--------TACACCTGTC
 G T A C G T A C A C G T A G T C A C G T A C T G G A T C G T A C C G T A C T A G A T C G T G C A A G T C A G T C A C G T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.51
Offset:8
Orientation:forward strand
Alignment:CCTCTGCCAGGACCTG--
--------NNCACCTGNN
 G T A C G T A C A C G T A G T C A C G T A C T G G A T C G T A C C G T A C T A G A T C G T G C A A G T C A G T C A C G T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A