Information for 6-TGAARGCTCAGGCRCT (Motif 11)

A G C T C T A G C G T A C G T A C T G A A T C G A T G C A G C T G A T C C T G A A C T G A C T G A T G C C T G A G T A C A C G T
Reverse Opposite:
C G T A C A T G A G C T A T C G G T A C T G A C A G C T C A T G C T G A A T C G A T G C A G C T A C G T G A C T A G T C C T G A
p-value:1e-12
log p-value:-2.893e+01
Information Content per bp:1.715
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif11.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.0 +/- 22.0bp
Average Position of motif in Background54.7 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0049.1_Nr2f2_1/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGAARGCTCAGGCRCT
TCTCAAAGGTCACGAG--
 A C G T A C G T A G C T C T A G C G T A C G T A C T G A A T C G A T G C A G C T G A T C C T G A A C T G A C T G A T G C C T G A G T A C A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TGAARGCTCAGGCRCT
---AGCCTCAGGCA--
 A G C T C T A G C G T A C G T A C T G A A T C G A T G C A G C T G A T C C T G A A C T G A C T G A T G C C T G A G T A C A C G T
A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGAARGCTCAGGCRCT
ANGNAAAGGTCA------
 A C G T A C G T A G C T C T A G C G T A C G T A C T G A A T C G A T G C A G C T G A T C C T G A A C T G A C T G A T G C C T G A G T A C A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGAARGCTCAGGCRCT
TCTCAAAGGTCACCTG--
 A C G T A C G T A G C T C T A G C G T A C G T A C T G A A T C G A T G C A G C T G A T C C T G A A C T G A C T G A T G C C T G A G T A C A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TGAARGCTCAGGCRCT
---AGCCTCAGGCA--
 A G C T C T A G C G T A C G T A C T G A A T C G A T G C A G C T G A T C C T G A A C T G A C T G A T G C C T G A G T A C A C G T
A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TGAARGCTCAGGCRCT
---CGCCTCAGGCA--
 A G C T C T A G C G T A C G T A C T G A A T C G A T G C A G C T G A T C C T G A A C T G A C T G A T G C C T G A G T A C A C G T
A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGAARGCTCAGGCRCT
-ATTGCCTCAGGCAAT
 A G C T C T A G C G T A C G T A C T G A A T C G A T G C A G C T G A T C C T G A A C T G A C T G A T G C C T G A G T A C A C G T
A C G T C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TGAARGCTCAGGCRCT
-----GCTCGGSCTC-
 A G C T C T A G C G T A C G T A C T G A A T C G A T G C A G C T G A T C C T G A A C T G A C T G A T G C C T G A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TGAARGCTCAGGCRCT
NTNATGCAAYMNNHTGMAAY
 A C G T A C G T A C G T A C G T A G C T C T A G C G T A C G T A C T G A A T C G A T G C A G C T G A T C C T G A A C T G A C T G A T G C C T G A G T A C A C G T
T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TGAARGCTCAGGCRCT
AAGGKGRCGCAGGCA--
 A C G T A G C T C T A G C G T A C G T A C T G A A T C G A T G C A G C T G A T C C T G A A C T G A C T G A T G C C T G A G T A C A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T