Information for 5-WTTGKTGAAAAATRAA (Motif 10)

C G T A A G C T C G A T A T C G A C T G A C G T A C T G G T C A G T C A C T G A G T C A C T G A A C G T C T G A C T G A C T G A
Reverse Opposite:
A G C T G A C T A G C T G T C A A G C T C A G T A G C T A C G T C A G T T G A C G T C A G T A C A T G C C G T A C T G A C G A T
p-value:1e-13
log p-value:-3.008e+01
Information Content per bp:1.685
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.6 +/- 26.3bp
Average Position of motif in Background42.0 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:WTTGKTGAAAAATRAA----
---GTTAAAAAAAAAAATTA
 C G T A A G C T C G A T A T C G A C T G A C G T A C T G G T C A G T C A C T G A G T C A C T G A A C G T C T G A C T G A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:WTTGKTGAAAAATRAA----
---GTTCAAAAAAAAAATTC
 C G T A A G C T C G A T A T C G A C T G A C G T A C T G G T C A G T C A C T G A G T C A C T G A A C G T C T G A C T G A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:WTTGKTGAAAAATRAA
---GGTTAAACATTAA
 C G T A A G C T C G A T A T C G A C T G A C G T A C T G G T C A G T C A C T G A G T C A C T G A A C G T C T G A C T G A C T G A
A C G T A C G T A C G T C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:WTTGKTGAAAAATRAA-
--ATGCTAAAAATAGAA
 C G T A A G C T C G A T A T C G A C T G A C G T A C T G G T C A G T C A C T G A G T C A C T G A A C G T C T G A C T G A C T G A A C G T
A C G T A C G T C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

PB0065.1_Sox15_1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:WTTGKTGAAAAATRAA---
--TAGTGAACAATAGATTT
 C G T A A G C T C G A T A T C G A C T G A C G T A C T G G T C A G T C A C T G A G T C A C T G A A C G T C T G A C T G A C T G A A C G T A C G T A C G T
A C G T A C G T G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----WTTGKTGAAAAATRAA
TTCAATTGTTCTAAAA----
 A C G T A C G T A C G T A C G T C G T A A G C T C G A T A T C G A C T G A C G T A C T G G T C A G T C A C T G A G T C A C T G A A C G T C T G A C T G A C T G A
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A A C G T A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:WTTGKTGAAAAATRAA
----DCYAAAAATAGM
 C G T A A G C T C G A T A T C G A C T G A C G T A C T G G T C A G T C A C T G A G T C A C T G A A C G T C T G A C T G A C T G A
A C G T A C G T A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--WTTGKTGAAAAATRAA
TAATTGTTCTAAAC----
 A C G T A C G T C G T A A G C T C G A T A T C G A C T G A C G T A C T G G T C A G T C A C T G A G T C A C T G A A C G T C T G A C T G A C T G A
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:WTTGKTGAAAAATRAA
-CAATTGCAAAAATAT
 C G T A A G C T C G A T A T C G A C T G A C G T A C T G G T C A G T C A C T G A G T C A C T G A A C G T C T G A C T G A C T G A
A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:WTTGKTGAAAAATRAA
----GCTAAAAATAGC
 C G T A A G C T C G A T A T C G A C T G A C G T A C T G G T C A G T C A C T G A G T C A C T G A A C G T C T G A C T G A C T G A
A C G T A C G T A C G T A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C