Information for 3-GTGAAAGGTA (Motif 6)

T C A G A G C T A C T G C G T A C T G A C T G A A C T G A C T G A C G T T G C A
Reverse Opposite:
A C G T C G T A G T A C A G T C A G C T A G C T C G A T A G T C C T G A A G T C
p-value:1e-10
log p-value:-2.501e+01
Information Content per bp:1.846
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif3.33%
Number of Background Sequences with motif95.5
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets47.2 +/- 30.6bp
Average Position of motif in Background50.7 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GTGAAAGGTA
GAAAGTGAAAGT--
 A C G T A C G T A C G T A C G T T C A G A G C T A C T G C G T A C T G A C T G A A C T G A C T G A C G T T G C A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GTGAAAGGTA---
GGAGAAAGGTGCGA
 A C G T T C A G A G C T A C T G C G T A C T G A C T G A A C T G A C T G A C G T T G C A A C G T A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Nr2f6/MA0677.1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GTGAAAGGTA-
GAGGTCAAAGGTCA
 A C G T A C G T A C G T T C A G A G C T A C T G C G T A C T G A C T G A A C T G A C T G A C G T T G C A A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTGAAAGGTA-
ANGNAAAGGTCA
 A C G T T C A G A G C T A C T G C G T A C T G A C T G A A C T G A C T G A C G T T G C A A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

PRDM1/MA0508.1/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GTGAAAGGTA
AGAAAGTGAAAGTGA
 A C G T A C G T A C G T A C G T A C G T T C A G A G C T A C T G C G T A C T G A C T G A A C T G A C T G A C G T T G C A
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

Rxra/MA0512.2/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GTGAAAGGTA-
GGGGTCAAAGGTCA
 A C G T A C G T A C G T T C A G A G C T A C T G C G T A C T G A C T G A A C T G A C T G A C G T T G C A A C G T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRB/MA0855.1/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GTGAAAGGTA-
GGGGTCAAAGGTCA
 A C G T A C G T A C G T T C A G A G C T A C T G C G T A C T G A C T G A A C T G A C T G A C G T T G C A A C G T
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

RXRG/MA0856.1/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GTGAAAGGTA-
GGGGTCAAAGGTCA
 A C G T A C G T A C G T T C A G A G C T A C T G C G T A C T G A C T G A A C T G A C T G A C G T T G C A A C G T
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GTGAAAGGTA-
GAGGTCAAAGGTCA
 A C G T A C G T A C G T T C A G A G C T A C T G C G T A C T G A C T G A A C T G A C T G A C G T T G C A A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GTGAAAGGTA---
GGATTGACAGGTCNTT
 A C G T A C G T A C G T T C A G A G C T A C T G C G T A C T G A C T G A A C T G A C T G A C G T T G C A A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T