Information for 1-AATGATCAAAAGTTAA (Motif 2)

C G T A C G T A A C G T A C T G C G T A A G C T A G T C C G T A G T C A T C G A C G T A A C T G A C G T A C G T C T G A C G T A
Reverse Opposite:
G A C T A G C T G T C A C G T A G T A C C G A T A G C T A C G T C G A T A C T G C T G A A C G T A G T C G T C A A C G T A C G T
p-value:1e-12
log p-value:-2.948e+01
Information Content per bp:1.914
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.3 +/- 17.8bp
Average Position of motif in Background46.6 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarb/MA0857.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AATGATCAAAAGTTAA
AAAGGTCAAAAGGTCA
 C G T A C G T A A C G T A C T G C G T A A G C T A G T C C G T A G T C A T C G A C G T A A C T G A C G T A C G T C T G A C G T A
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

Tcf7/MA0769.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AATGATCAAAAGTTAA
AAAGATCAAAGG----
 C G T A C G T A A C G T A C T G C G T A A G C T A G T C C G T A G T C A T C G A C G T A A C T G A C G T A C G T C T G A C G T A
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AATGATCAAAAGTTAA
AAAGATCAAAGGGTT-
 C G T A C G T A A C G T A C T G C G T A A G C T A G T C C G T A G T C A T C G A C G T A A C T G A C G T A C G T C T G A C G T A
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AATGATCAAAAGTTAA-
AAAGGTCAAAGGTCAAC
 C G T A C G T A A C G T A C T G C G T A A G C T A G T C C G T A G T C A T C G A C G T A A C T G A C G T A C G T C T G A C G T A A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

Rarg/MA0859.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AATGATCAAAAGTTAA-
-AAGGTCAAAAGGTCAA
 C G T A C G T A A C G T A C T G C G T A A G C T A G T C C G T A G T C A T C G A C G T A A C T G A C G T A C G T C T G A C G T A A C G T
A C G T T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.58
Offset:7
Orientation:forward strand
Alignment:AATGATCAAAAGTTAA
-------AAAAGTCAA
 C G T A C G T A A C G T A C T G C G T A A G C T A G T C C G T A G T C A T C G A C G T A A C T G A C G T A C G T C T G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AATGATCAAAAGTTAA
NANAGATCAAAGGGNNN
 A C G T C G T A C G T A A C G T A C T G C G T A A G C T A G T C C G T A G T C A T C G A C G T A A C T G A C G T A C G T C T G A C G T A
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AATGATCAAAAGTTAA
NNNAGATCAAAGGANNN
 A C G T C G T A C G T A A C G T A C T G C G T A A G C T A G T C C G T A G T C A T C G A C G T A A C T G A C G T A C G T C T G A C G T A
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AATGATCAAAAGTTAA
TATAGATCAAAGGAAAA
 A C G T C G T A C G T A A C G T A C T G C G T A A G C T A G T C C G T A G T C A T C G A C G T A A C T G A C G T A C G T C T G A C G T A
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AATGATCAAAAGTTAA-
--AGATGKDGAGATAAG
 C G T A C G T A A C G T A C T G C G T A A G C T A G T C C G T A G T C A T C G A C G T A A C T G A C G T A C G T C T G A C G T A A C G T
A C G T A C G T C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G