p-value: | 1e-7 |
log p-value: | -1.713e+01 |
Information Content per bp: | 1.907 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 2.50% |
Number of Background Sequences with motif | 90.8 |
Percentage of Background Sequences with motif | 0.19% |
Average Position of motif in Targets | 36.7 +/- 11.9bp |
Average Position of motif in Background | 47.8 +/- 29.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0065.1_Sox15_1/Jaspar
Match Rank: | 1 |
Score: | 0.67 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CAACAKTAGA--- TAGTGAACAATAGATTT |
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PB0173.1_Sox21_2/Jaspar
Match Rank: | 2 |
Score: | 0.66 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----CAACAKTAGA-- NNNNNGAACAATTGANN |
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PB0070.1_Sox30_1/Jaspar
Match Rank: | 3 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CAACAKTAGA--- AATGAACAATGGAATT |
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PB0074.1_Sox8_1/Jaspar
Match Rank: | 4 |
Score: | 0.66 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CAACAKTAGA--- TNNAGAACAATANATNN |
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PB0073.1_Sox7_1/Jaspar
Match Rank: | 5 |
Score: | 0.66 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------CAACAKTAGA------ AATAAAGAACAATAGAATTTCA |
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PB0067.1_Sox18_1/Jaspar
Match Rank: | 6 |
Score: | 0.65 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----CAACAKTAGA- NNTNANAACAATTNNA |
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SOX9/MA0077.1/Jaspar
Match Rank: | 7 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CAACAKTAGA GAACAATGG- |
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Sox5/MA0087.1/Jaspar
Match Rank: | 8 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CAACAKTAGA NAACAAT--- |
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PB0066.1_Sox17_1/Jaspar
Match Rank: | 9 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CAACAKTAGA--- ATAAACAATTAAACA |
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PB0072.1_Sox5_1/Jaspar
Match Rank: | 10 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CAACAKTAGA-- TTTAGAACAATAAAAT |
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