Information for 5-CCCAGCTCCCAGCTGG (Motif 7)

A T G C A G T C A G T C C T G A A C T G A T G C C G A T A G T C A G T C A G T C C G T A A C T G A G T C C G A T A C T G T A C G
Reverse Opposite:
A G T C A G T C C G T A A C T G A G T C A C G T A C T G C T A G A C T G C G T A A T C G A G T C A G C T C T A G A C T G A T C G
p-value:1e-14
log p-value:-3.235e+01
Information Content per bp:1.846
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.5 +/- 23.5bp
Average Position of motif in Background17.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.67
Offset:8
Orientation:reverse strand
Alignment:CCCAGCTCCCAGCTGG--
--------HCAGCTGDTN
 A T G C A G T C A G T C C T G A A C T G A T G C C G A T A G T C A G T C A G T C C G T A A C T G A G T C C G A T A C T G T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.65
Offset:8
Orientation:reverse strand
Alignment:CCCAGCTCCCAGCTGG--
--------CCAGCTGTTN
 A T G C A G T C A G T C C T G A A C T G A T G C C G A T A G T C A G T C A G T C C G T A A C T G A G T C C G A T A C T G T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:3
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CCCAGCTCCCAGCTGG-
-----NNVVCAGCTGBN
 A T G C A G T C A G T C C T G A A C T G A T G C C G A T A G T C A G T C A G T C C G T A A C T G A G T C C G A T A C T G T A C G A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.64
Offset:8
Orientation:forward strand
Alignment:CCCAGCTCCCAGCTGG--
--------NCAGCTGCTG
 A T G C A G T C A G T C C T G A A C T G A T G C C G A T A G T C A G T C A G T C C G T A A C T G A G T C C G A T A C T G T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:CCCAGCTCCCAGCTGG-----
------DCHCAGCAGGRGGCC
 A T G C A G T C A G T C C T G A A C T G A T G C C G A T A G T C A G T C A G T C C G T A A C T G A G T C C G A T A C T G T A C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.64
Offset:9
Orientation:reverse strand
Alignment:CCCAGCTCCCAGCTGG-
---------CAGCTGNT
 A T G C A G T C A G T C C T G A A C T G A T G C C G A T A G T C A G T C A G T C C G T A A C T G A G T C C G A T A C T G T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:7
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:CCCAGCTCCCAGCTGG
------NNVCAGCTGB
 A T G C A G T C A G T C C T G A A C T G A T G C C G A T A G T C A G T C A G T C C G T A A C T G A G T C C G A T A C T G T A C G
A C G T A C G T A C G T A C G T A C G T A C G T C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.63
Offset:6
Orientation:forward strand
Alignment:CCCAGCTCCCAGCTGG
------NNACAGCTGC
 A T G C A G T C A G T C C T G A A C T G A T G C C G A T A G T C A G T C A G T C C G T A A C T G A G T C C G A T A C T G T A C G
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.63
Offset:7
Orientation:forward strand
Alignment:CCCAGCTCCCAGCTGG---
-------CACAGCAGGGGG
 A T G C A G T C A G T C C T G A A C T G A T G C C G A T A G T C A G T C A G T C C G T A A C T G A G T C C G A T A C T G T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

NHLH1/MA0048.2/Jaspar

Match Rank:10
Score:0.62
Offset:7
Orientation:forward strand
Alignment:CCCAGCTCCCAGCTGG-
-------CGCAGCTGCG
 A T G C A G T C A G T C C T G A A C T G A T G C C G A T A G T C A G T C A G T C C G T A A C T G A G T C C G A T A C T G T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G