Information for 17-TGAKCCCAACSGG (Motif 33)

A G C T C T A G C G T A A C T G A T G C A G T C A G T C C G T A C T G A A G T C A T G C A C T G A C T G
Reverse Opposite:
A G T C G T A C A T C G A C T G A G C T A C G T A C T G A C T G A T C G T G A C A C G T A G T C C T G A
p-value:1e-8
log p-value:-1.937e+01
Information Content per bp:1.907
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.8 +/- 27.4bp
Average Position of motif in Background47.0 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGAKCCCAACSGG
ATAATCCC------
 A C G T A G C T C T A G C G T A A C T G A T G C A G T C A G T C C G T A C T G A A G T C A T G C A C T G A C T G
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGAKCCCAACSGG--
ACTATGCCAACCTACC
 A C G T A G C T C T A G C G T A A C T G A T G C A G T C A G T C C G T A C T G A A G T C A T G C A C T G A C T G A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGAKCCCAACSGG-----
---DCHCAGCAGGRGGCC
 A G C T C T A G C G T A A C T G A T G C A G T C A G T C C G T A C T G A A G T C A T G C A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TGAKCCCAACSGG
TGTCGTGACCCCTTAAT-
 A C G T A C G T A C G T A C G T A C G T A G C T C T A G C G T A A C T G A T G C A G T C A G T C C G T A C T G A A G T C A T G C A C T G A C T G
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGAKCCCAACSGG
--ATGCCAACC--
 A G C T C T A G C G T A A C T G A T G C A G T C A G T C C G T A C T G A A G T C A T G C A C T G A C T G
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TGAKCCCAACSGG
NNNNTTGACCCCTNNNN-
 A C G T A C G T A C G T A C G T A C G T A G C T C T A G C G T A A C T G A T G C A G T C A G T C C G T A C T G A A G T C A T G C A C T G A C T G
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TGAKCCCAACSGG
NNANTTGACCCCTNNNN-
 A C G T A C G T A C G T A C G T A C G T A G C T C T A G C G T A A C T G A T G C A G T C A G T C C G T A C T G A A G T C A T G C A C T G A C T G
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G A C G T

POL001.1_MTE/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGAKCCCAACSGG---
TTTCGAGCGGAACGGTCGC
 A C G T A C G T A C G T A G C T C T A G C G T A A C T G A T G C A G T C A G T C C G T A C T G A A G T C A T G C A C T G A C T G A C G T A C G T A C G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TGAKCCCAACSGG--
-----CCAACTGCCA
 A G C T C T A G C G T A A C T G A T G C A G T C A G T C C G T A C T G A A G T C A T G C A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

PB0150.1_Mybl1_2/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGAKCCCAACSGG----
--CGACCAACTGCCGTG
 A G C T C T A G C G T A A C T G A T G C A G T C A G T C C G T A C T G A A G T C A T G C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G