Information for 18-ACTGAAAAATCACCCA (Motif 29)

C G T A A G T C A C G T A C T G C G T A C T G A G C T A C G T A C G T A C G A T A G T C C G T A A G T C A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A C T G A C G T A C T G C G T A A C G T A C G T C G A T G A C T A C G T A G T C C G T A A C T G A C G T
p-value:1e-8
log p-value:-2.036e+01
Information Content per bp:1.916
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.2 +/- 23.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ACTGAAAAATCACCCA-
AAGGCGAAATCATCGCA
 C G T A A G T C A C G T A C T G C G T A C T G A G C T A C G T A C G T A C G A T A G T C C G T A A G T C A G T C A G T C C G T A A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.56
Offset:5
Orientation:forward strand
Alignment:ACTGAAAAATCACCCA
-----CAAATCACTG-
 C G T A A G T C A C G T A C T G C G T A C T G A G C T A C G T A C G T A C G A T A G T C C G T A A G T C A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:ACTGAAAAATCACCCA--
------GGACCACCCACG
 C G T A A G T C A C G T A C T G C G T A C T G A G C T A C G T A C G T A C G A T A G T C C G T A A G T C A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:4
Score:0.52
Offset:2
Orientation:forward strand
Alignment:ACTGAAAAATCACCCA
--TGATTRATGGCY--
 C G T A A G T C A C G T A C T G C G T A C T G A G C T A C G T A C G T A C G A T A G T C C G T A A G T C A G T C A G T C C G T A
A C G T A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:5
Score:0.50
Offset:8
Orientation:forward strand
Alignment:ACTGAAAAATCACCCA--
--------ATCACCCCAC
 C G T A A G T C A C G T A C T G C G T A C T G A G C T A C G T A C G T A C G A T A G T C C G T A A G T C A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

Hoxa9/MA0594.1/Jaspar

Match Rank:6
Score:0.49
Offset:1
Orientation:forward strand
Alignment:ACTGAAAAATCACCCA
-GCCATAAATCA----
 C G T A A G T C A C G T A C T G C G T A C T G A G C T A C G T A C G T A C G A T A G T C C G T A A G T C A G T C A G T C C G T A
A C G T T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:ACTGAAAAATCACCCA
AATGGAAAAT------
 C G T A A G T C A C G T A C T G C G T A C T G A G C T A C G T A C G T A C G A T A G T C C G T A A G T C A G T C A G T C C G T A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---ACTGAAAAATCACCCA
NNNVCTGWGYAAACASN--
 A C G T A C G T A C G T C G T A A G T C A C G T A C T G C G T A C T G A G C T A C G T A C G T A C G A T A G T C C G T A A G T C A G T C A G T C C G T A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.49
Offset:10
Orientation:reverse strand
Alignment:ACTGAAAAATCACCCA----
----------CRCCCACGCA
 C G T A A G T C A C G T A C T G C G T A C T G A G C T A C G T A C G T A C G A T A G T C C G T A A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

PB0201.1_Zfp281_2/Jaspar

Match Rank:10
Score:0.48
Offset:4
Orientation:forward strand
Alignment:ACTGAAAAATCACCCA-----
----AGGAGACCCCCAATTTG
 C G T A A G T C A C G T A C T G C G T A C T G A G C T A C G T A C G T A C G A T A G T C C G T A A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G