Information for 17-GTCCAACACCACAGCG (Motif 28)

A C T G A C G T G T A C A G T C C G T A C G T A A G T C C G T A A G T C A G T C C T G A A G T C C G T A C T A G A G T C A C T G
Reverse Opposite:
A G T C C T A G A G T C A C G T A C T G A G C T A C T G A C T G A C G T A C T G A C G T C G A T A C T G A C T G C G T A G T A C
p-value:1e-8
log p-value:-2.036e+01
Information Content per bp:1.918
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.5 +/- 22.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:GTCCAACACCACAGCG
-----AAACCACAGC-
 A C T G A C G T G T A C A G T C C G T A C G T A A G T C C G T A A G T C A G T C C T G A A G T C C G T A C T A G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GTCCAACACCACAGCG
----NWAACCACADNN
 A C T G A C G T G T A C A G T C C G T A C G T A A G T C C G T A A G T C A G T C C T G A A G T C C G T A C T A G A G T C A C T G
A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GTCCAACACCACAGCG
-----AAACCACAGAN
 A C T G A C G T G T A C A G T C C G T A C G T A A G T C C G T A A G T C A G T C C T G A A G T C C G T A C T A G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GTCCAACACCACAGCG
----NAAACCACAG--
 A C T G A C G T G T A C A G T C C G T A C G T A A G T C C G T A A G T C A G T C C T G A A G T C C G T A C T A G A G T C A C T G
A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GTCCAACACCACAGCG
-----AAACCACANN-
 A C T G A C G T G T A C A G T C C G T A C G T A A G T C C G T A A G T C A G T C C T G A A G T C C G T A C T A G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GTCCAACACCACAGCG
-----AAACCGCAAA-
 A C T G A C G T G T A C A G T C C G T A C G T A A G T C C G T A A G T C A G T C C T G A A G T C C G T A C T A G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GTCCAACACCACAGCG
-----AAACCGCAA--
 A C T G A C G T G T A C A G T C C G T A C G T A A G T C C G T A A G T C A G T C C T G A A G T C C G T A C T A G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GTCCAACACCACAGCG
NNAGTCCCACTCNNNN---
 A C G T A C G T A C G T A C T G A C G T G T A C A G T C C G T A C G T A A G T C C G T A A G T C A G T C C T G A A G T C C G T A C T A G A G T C A C T G
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTCCAACACCACAGCG
NNGGCGACACCTCNNN-
 A C G T A C T G A C G T G T A C A G T C C G T A C G T A A G T C C G T A A G T C A G T C C T G A A G T C C G T A C T A G A G T C A C T G
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:GTCCAACACCACAGCG
---------CACAGN-
 A C T G A C G T G T A C A G T C C G T A C G T A A G T C C G T A A G T C A G T C C T G A A G T C C G T A C T A G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T