Information for 11-GGGRATGGCAGCC (Motif 20)

C T A G A C T G A C T G C T A G C G T A A C G T A C T G A C T G A G T C C T G A A C T G A G T C G T A C
Reverse Opposite:
A C T G A C T G A G T C A G C T A C T G A G T C A G T C C G T A A C G T G A C T A G T C A G T C A G T C
p-value:1e-9
log p-value:-2.166e+01
Information Content per bp:1.892
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.5 +/- 25.5bp
Average Position of motif in Background55.9 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGGRATGGCAGCC
--TAATGGCGGNC
 C T A G A C T G A C T G C T A G C G T A A C G T A C T G A C T G A G T C C T G A A C T G A G T C G T A C
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGGRATGGCAGCC
-GGGATTGCATNN
 C T A G A C T G A C T G C T A G C G T A A C G T A C T G A C T G A G T C C T G A A C T G A G T C G T A C
A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGGRATGGCAGCC
TGGGTGTGGC----
 A C G T C T A G A C T G A C T G C T A G C G T A A C G T A C T G A C T G A G T C C T G A A C T G A G T C G T A C
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGGRATGGCAGCC
GGGAATTGTAGT-
 C T A G A C T G A C T G C T A G C G T A A C G T A C T G A C T G A G T C C T G A A C T G A G T C G T A C
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGGRATGGCAGCC
DGGGYGKGGC----
 A C G T C T A G A C T G A C T G C T A G C G T A A C G T A C T G A C T G A G T C C T G A A C T G A G T C G T A C
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGGRATGGCAGCC----
-ACTATGCCAACCTACC
 C T A G A C T G A C T G C T A G C G T A A C G T A C T G A C T G A G T C C T G A A C T G A G T C G T A C A C G T A C G T A C G T A C G T
A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

YY1(Zf)/Promoter/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGGRATGGCAGCC
CAAGATGGCGGC-
 C T A G A C T G A C T G C T A G C G T A A C G T A C T G A C T G A G T C C T G A A C T G A G T C G T A C
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGGRATGGCAGCC
MKGGGYGTGGCC---
 A C G T A C G T C T A G A C T G A C T G C T A G C G T A A C G T A C T G A C T G A G T C C T G A A C T G A G T C G T A C
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T A C G T A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGGRATGGCAGCC
RGTGGGYGTGGC----
 A C G T A C G T A C G T C T A G A C T G A C T G C T A G C G T A A C G T A C T G A C T G A G T C C T G A A C T G A G T C G T A C
C T G A T C A G C A G T C T A G A T C G A C T G G A T C C A T G A C G T C A T G A C T G A G T C A C G T A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGGRATGGCAGCC
TGGGTGGGGC----
 A C G T C T A G A C T G A C T G C T A G C G T A A C G T A C T G A C T G A G T C C T G A A C T G A G T C G T A C
C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T A C G T A C G T