Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer | 1e-52 | -1.206e+02 | 0.0000 | 85.0 | 10.47% | 539.8 | 1.12% | motif file (matrix) |
svg |
2 |
| Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer | 1e-39 | -9.024e+01 | 0.0000 | 110.0 | 13.55% | 1404.1 | 2.93% | motif file (matrix) |
svg |
3 |
| Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer | 1e-34 | -8.014e+01 | 0.0000 | 143.0 | 17.61% | 2578.7 | 5.37% | motif file (matrix) |
svg |
4 |
| Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer | 1e-32 | -7.408e+01 | 0.0000 | 95.0 | 11.70% | 1271.6 | 2.65% | motif file (matrix) |
svg |
5 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-28 | -6.484e+01 | 0.0000 | 159.0 | 19.58% | 3576.7 | 7.45% | motif file (matrix) |
svg |
6 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-26 | -6.188e+01 | 0.0000 | 78.0 | 9.61% | 1024.0 | 2.13% | motif file (matrix) |
svg |
7 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-25 | -5.984e+01 | 0.0000 | 136.0 | 16.75% | 2898.1 | 6.04% | motif file (matrix) |
svg |
8 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-25 | -5.776e+01 | 0.0000 | 83.0 | 10.22% | 1234.0 | 2.57% | motif file (matrix) |
svg |
9 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-23 | -5.518e+01 | 0.0000 | 65.0 | 8.00% | 797.9 | 1.66% | motif file (matrix) |
svg |
10 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-23 | -5.472e+01 | 0.0000 | 72.0 | 8.87% | 986.9 | 2.06% | motif file (matrix) |
svg |
11 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-23 | -5.390e+01 | 0.0000 | 80.0 | 9.85% | 1224.0 | 2.55% | motif file (matrix) |
svg |
12 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-23 | -5.320e+01 | 0.0000 | 83.0 | 10.22% | 1326.7 | 2.76% | motif file (matrix) |
svg |
13 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-18 | -4.364e+01 | 0.0000 | 45.0 | 5.54% | 480.8 | 1.00% | motif file (matrix) |
svg |
14 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-16 | -3.803e+01 | 0.0000 | 102.0 | 12.56% | 2391.6 | 4.98% | motif file (matrix) |
svg |
15 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-15 | -3.475e+01 | 0.0000 | 90.0 | 11.08% | 2066.5 | 4.31% | motif file (matrix) |
svg |
16 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-15 | -3.471e+01 | 0.0000 | 140.0 | 17.24% | 4056.2 | 8.45% | motif file (matrix) |
svg |
17 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-14 | -3.403e+01 | 0.0000 | 32.0 | 3.94% | 310.9 | 0.65% | motif file (matrix) |
svg |
18 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-14 | -3.366e+01 | 0.0000 | 120.0 | 14.78% | 3276.7 | 6.83% | motif file (matrix) |
svg |
19 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-14 | -3.289e+01 | 0.0000 | 37.0 | 4.56% | 439.3 | 0.92% | motif file (matrix) |
svg |
20 |
| E-box(bHLH)/Promoter/Homer | 1e-14 | -3.235e+01 | 0.0000 | 17.0 | 2.09% | 68.4 | 0.14% | motif file (matrix) |
svg |
21 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-13 | -3.221e+01 | 0.0000 | 20.0 | 2.46% | 108.2 | 0.23% | motif file (matrix) |
svg |
22 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-13 | -3.032e+01 | 0.0000 | 115.0 | 14.16% | 3231.8 | 6.73% | motif file (matrix) |
svg |
23 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-12 | -2.940e+01 | 0.0000 | 88.0 | 10.84% | 2194.4 | 4.57% | motif file (matrix) |
svg |
24 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-12 | -2.840e+01 | 0.0000 | 52.0 | 6.40% | 952.9 | 1.99% | motif file (matrix) |
svg |
25 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-12 | -2.817e+01 | 0.0000 | 129.0 | 15.89% | 3939.5 | 8.21% | motif file (matrix) |
svg |
26 |
| CRE(bZIP)/Promoter/Homer | 1e-12 | -2.769e+01 | 0.0000 | 28.0 | 3.45% | 299.1 | 0.62% | motif file (matrix) |
svg |
27 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-11 | -2.648e+01 | 0.0000 | 87.0 | 10.71% | 2279.4 | 4.75% | motif file (matrix) |
svg |
28 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-10 | -2.410e+01 | 0.0000 | 72.0 | 8.87% | 1798.8 | 3.75% | motif file (matrix) |
svg |
29 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-8 | -2.039e+01 | 0.0000 | 22.0 | 2.71% | 258.9 | 0.54% | motif file (matrix) |
svg |
30 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-8 | -2.023e+01 | 0.0000 | 38.0 | 4.68% | 719.8 | 1.50% | motif file (matrix) |
svg |
31 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-8 | -2.004e+01 | 0.0000 | 59.0 | 7.27% | 1469.8 | 3.06% | motif file (matrix) |
svg |
32 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-8 | -1.977e+01 | 0.0000 | 41.0 | 5.05% | 832.0 | 1.73% | motif file (matrix) |
svg |
33 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-7 | -1.734e+01 | 0.0000 | 33.0 | 4.06% | 636.4 | 1.33% | motif file (matrix) |
svg |
34 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-7 | -1.714e+01 | 0.0000 | 38.0 | 4.68% | 810.9 | 1.69% | motif file (matrix) |
svg |
35 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-6 | -1.579e+01 | 0.0000 | 92.0 | 11.33% | 3084.4 | 6.43% | motif file (matrix) |
svg |
36 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-6 | -1.568e+01 | 0.0000 | 81.0 | 9.98% | 2602.3 | 5.42% | motif file (matrix) |
svg |
37 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-6 | -1.563e+01 | 0.0000 | 84.0 | 10.34% | 2738.7 | 5.71% | motif file (matrix) |
svg |
38 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-6 | -1.555e+01 | 0.0000 | 96.0 | 11.82% | 3283.7 | 6.84% | motif file (matrix) |
svg |
39 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-6 | -1.537e+01 | 0.0000 | 117.0 | 14.41% | 4274.6 | 8.91% | motif file (matrix) |
svg |
40 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-6 | -1.492e+01 | 0.0000 | 60.0 | 7.39% | 1749.4 | 3.64% | motif file (matrix) |
svg |
41 |
| ETS(ETS)/Promoter/Homer | 1e-6 | -1.469e+01 | 0.0000 | 27.0 | 3.33% | 514.0 | 1.07% | motif file (matrix) |
svg |
42 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-6 | -1.457e+01 | 0.0000 | 50.0 | 6.16% | 1360.2 | 2.83% | motif file (matrix) |
svg |
43 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.451e+01 | 0.0000 | 40.0 | 4.93% | 976.6 | 2.03% | motif file (matrix) |
svg |
44 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-6 | -1.439e+01 | 0.0000 | 55.0 | 6.77% | 1571.4 | 3.27% | motif file (matrix) |
svg |
45 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.387e+01 | 0.0000 | 24.0 | 2.96% | 440.2 | 0.92% | motif file (matrix) |
svg |
46 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-5 | -1.379e+01 | 0.0000 | 74.0 | 9.11% | 2419.0 | 5.04% | motif file (matrix) |
svg |
47 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.367e+01 | 0.0000 | 37.0 | 4.56% | 897.8 | 1.87% | motif file (matrix) |
svg |
48 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-5 | -1.299e+01 | 0.0000 | 84.0 | 10.34% | 2927.5 | 6.10% | motif file (matrix) |
svg |
49 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-5 | -1.269e+01 | 0.0000 | 65.0 | 8.00% | 2095.8 | 4.37% | motif file (matrix) |
svg |
50 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-5 | -1.269e+01 | 0.0000 | 70.0 | 8.62% | 2316.0 | 4.83% | motif file (matrix) |
svg |
51 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-5 | -1.209e+01 | 0.0000 | 48.0 | 5.91% | 1405.8 | 2.93% | motif file (matrix) |
svg |
52 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-5 | -1.202e+01 | 0.0000 | 52.0 | 6.40% | 1576.1 | 3.28% | motif file (matrix) |
svg |
53 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-5 | -1.152e+01 | 0.0001 | 12.0 | 1.48% | 145.8 | 0.30% | motif file (matrix) |
svg |
54 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-4 | -1.077e+01 | 0.0001 | 28.0 | 3.45% | 676.4 | 1.41% | motif file (matrix) |
svg |
55 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-4 | -1.068e+01 | 0.0002 | 42.0 | 5.17% | 1233.7 | 2.57% | motif file (matrix) |
svg |
56 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.022e+01 | 0.0002 | 8.0 | 0.99% | 71.5 | 0.15% | motif file (matrix) |
svg |
57 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-4 | -1.018e+01 | 0.0002 | 115.0 | 14.16% | 4681.8 | 9.75% | motif file (matrix) |
svg |
58 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-4 | -9.457e+00 | 0.0005 | 51.0 | 6.28% | 1696.8 | 3.54% | motif file (matrix) |
svg |
59 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-3 | -9.138e+00 | 0.0007 | 47.0 | 5.79% | 1541.8 | 3.21% | motif file (matrix) |
svg |
60 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-3 | -9.063e+00 | 0.0007 | 53.0 | 6.53% | 1814.0 | 3.78% | motif file (matrix) |
svg |
61 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-3 | -8.897e+00 | 0.0008 | 48.0 | 5.91% | 1602.9 | 3.34% | motif file (matrix) |
svg |
62 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-3 | -8.724e+00 | 0.0010 | 49.0 | 6.03% | 1659.5 | 3.46% | motif file (matrix) |
svg |
63 |
| TATA-Box(TBP)/Promoter/Homer | 1e-3 | -8.398e+00 | 0.0013 | 101.0 | 12.44% | 4186.5 | 8.72% | motif file (matrix) |
svg |
64 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-3 | -7.941e+00 | 0.0020 | 22.0 | 2.71% | 565.9 | 1.18% | motif file (matrix) |
svg |
65 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.882e+00 | 0.0021 | 39.0 | 4.80% | 1274.4 | 2.66% | motif file (matrix) |
svg |
66 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-3 | -7.674e+00 | 0.0026 | 52.0 | 6.40% | 1878.1 | 3.91% | motif file (matrix) |
svg |
67 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-3 | -7.404e+00 | 0.0033 | 81.0 | 9.98% | 3303.2 | 6.88% | motif file (matrix) |
svg |
68 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.195e+00 | 0.0040 | 6.0 | 0.74% | 62.1 | 0.13% | motif file (matrix) |
svg |
69 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-3 | -7.160e+00 | 0.0041 | 46.0 | 5.67% | 1643.2 | 3.42% | motif file (matrix) |
svg |
70 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-3 | -7.085e+00 | 0.0044 | 52.0 | 6.40% | 1929.9 | 4.02% | motif file (matrix) |
svg |
71 |
| Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer | 1e-3 | -6.979e+00 | 0.0048 | 16.0 | 1.97% | 378.2 | 0.79% | motif file (matrix) |
svg |
72 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-2 | -6.766e+00 | 0.0058 | 21.0 | 2.59% | 579.4 | 1.21% | motif file (matrix) |
svg |
73 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -6.709e+00 | 0.0061 | 66.0 | 8.13% | 2640.3 | 5.50% | motif file (matrix) |
svg |
74 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.027e+00 | 0.0119 | 46.0 | 5.67% | 1742.7 | 3.63% | motif file (matrix) |
svg |
75 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.665e+00 | 0.0168 | 16.0 | 1.97% | 432.6 | 0.90% | motif file (matrix) |
svg |
76 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.640e+00 | 0.0170 | 23.0 | 2.83% | 723.6 | 1.51% | motif file (matrix) |
svg |
77 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-2 | -5.446e+00 | 0.0204 | 75.0 | 9.24% | 3245.0 | 6.76% | motif file (matrix) |
svg |
78 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-2 | -5.285e+00 | 0.0237 | 18.0 | 2.22% | 532.1 | 1.11% | motif file (matrix) |
svg |
79 |
| Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-2 | -5.197e+00 | 0.0255 | 15.0 | 1.85% | 414.0 | 0.86% | motif file (matrix) |
svg |
80 |
| EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer | 1e-2 | -5.190e+00 | 0.0255 | 10.0 | 1.23% | 224.4 | 0.47% | motif file (matrix) |
svg |
81 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -4.997e+00 | 0.0304 | 48.0 | 5.91% | 1944.1 | 4.05% | motif file (matrix) |
svg |
82 |
| NFY(CCAAT)/Promoter/Homer | 1e-2 | -4.961e+00 | 0.0311 | 37.0 | 4.56% | 1414.5 | 2.95% | motif file (matrix) |
svg |
83 |
| ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer | 1e-2 | -4.952e+00 | 0.0311 | 7.0 | 0.86% | 129.3 | 0.27% | motif file (matrix) |
svg |
84 |
| Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.896e+00 | 0.0324 | 25.0 | 3.08% | 862.0 | 1.80% | motif file (matrix) |
svg |
85 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-2 | -4.887e+00 | 0.0324 | 81.0 | 9.98% | 3636.5 | 7.58% | motif file (matrix) |
svg |
86 |
| T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer | 1e-2 | -4.800e+00 | 0.0348 | 3.0 | 0.37% | 24.1 | 0.05% | motif file (matrix) |
svg |
87 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-2 | -4.766e+00 | 0.0356 | 42.0 | 5.17% | 1675.8 | 3.49% | motif file (matrix) |
svg |
88 |
| PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer | 1e-2 | -4.733e+00 | 0.0364 | 15.0 | 1.85% | 437.2 | 0.91% | motif file (matrix) |
svg |
89 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -4.688e+00 | 0.0376 | 16.0 | 1.97% | 481.9 | 1.00% | motif file (matrix) |
svg |
90 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.679e+00 | 0.0376 | 27.0 | 3.33% | 969.3 | 2.02% | motif file (matrix) |
svg |
91 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.666e+00 | 0.0376 | 27.0 | 3.33% | 970.7 | 2.02% | motif file (matrix) |
svg |
92 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-2 | -4.654e+00 | 0.0377 | 27.0 | 3.33% | 971.4 | 2.02% | motif file (matrix) |
svg |