Information for 12-AAAGCCAACA (Motif 18)

C T G A G T C A G C T A C T A G A G T C T G A C G T C A G T C A A G T C G C T A
Reverse Opposite:
C G A T T C A G C A G T C A G T A C T G T C A G G A T C C G A T A C G T G A C T
p-value:1e-9
log p-value:-2.220e+01
Information Content per bp:1.631
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.46%
Number of Background Sequences with motif190.0
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets53.4 +/- 21.5bp
Average Position of motif in Background52.5 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AAAGCCAACA
AAAAGTCAA--
A C G T C T G A G T C A G C T A C T A G A G T C T G A C G T C A G T C A A G T C G C T A
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AAAGCCAACA
WAAGTAAAYA
C T G A G T C A G C T A C T A G A G T C T G A C G T C A G T C A A G T C G C T A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AAAGCCAACA
AAAGTAAACA
C T G A G T C A G C T A C T A G A G T C T G A C G T C A G T C A A G T C G C T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AAAGCCAACA
AAAGTAAACA
C T G A G T C A G C T A C T A G A G T C T G A C G T C A G T C A A G T C G C T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AAAGCCAACA----
CAAAGTAAACANNNN
A C G T C T G A G T C A G C T A C T A G A G T C T G A C G T C A G T C A A G T C G C T A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FOXC2/MA0846.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAAGCCAACA--
TAAGTAAACAAA
C T G A G T C A G C T A C T A G A G T C T G A C G T C A G T C A A G T C G C T A A C G T A C G T
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

Foxa2/MA0047.2/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AAAGCCAACA
NCTAAGTAAACA
A C G T A C G T C T G A G T C A G C T A C T A G A G T C T G A C G T C A G T C A A G T C G C T A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AAAGCCAACA--
TATGTAAACANG
C T G A G T C A G C T A C T A G A G T C T G A C G T C A G T C A A G T C G C T A A C G T A C G T
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AAAGCCAACA--
TGCCAAAATAAACANN
A C G T A C G T A C G T A C G T C T G A G T C A G C T A C T A G A G T C T G A C G T C A G T C A A G T C G C T A A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AAAGCCAACA---
NCWRWGTAAACANSV
A C G T A C G T C T G A G T C A G C T A C T A G A G T C T G A C G T C A G T C A A G T C G C T A A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G