Information for 11-GACCTTTGAA (Motif 17)

A C T G G T C A G T A C A G T C A G C T A C G T A C G T A C T G C G T A G C T A
Reverse Opposite:
C G A T G C A T A G T C C G T A T G C A C T G A C T A G A C T G C A G T G T A C
p-value:1e-10
log p-value:-2.311e+01
Information Content per bp:1.814
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.08%
Number of Background Sequences with motif291.2
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets58.4 +/- 27.7bp
Average Position of motif in Background50.2 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXRG/MA0856.1/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GACCTTTGAA---
TGACCTTTGACCCC
 A C G T A C T G G T C A G T A C A G T C A G C T A C G T A C G T A C T G C G T A G C T A A C G T A C G T A C G T
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

Nr2f6/MA0677.1/Jaspar

Match Rank:2
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GACCTTTGAA---
TGACCTTTGACCTN
 A C G T A C T G G T C A G T A C A G T C A G C T A C G T A C G T A C T G C G T A G C T A A C G T A C G T A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.80
Offset:-5
Orientation:reverse strand
Alignment:-----GACCTTTGAA-
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A G T A C A G T C A G C T A C G T A C G T A C T G C G T A G C T A A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Rxra/MA0512.2/Jaspar

Match Rank:4
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GACCTTTGAA---
TGACCTTTGACCCC
 A C G T A C T G G T C A G T A C A G T C A G C T A C G T A C G T A C T G C G T A G C T A A C G T A C G T A C G T
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

RXRB/MA0855.1/Jaspar

Match Rank:5
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GACCTTTGAA---
TGACCTTTGACCCC
 A C G T A C T G G T C A G T A C A G T C A G C T A C G T A C G T A C T G C G T A G C T A A C G T A C G T A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:GACCTTTGAA--
--CCTTTGATGT
 A C T G G T C A G T A C A G T C A G C T A C G T A C G T A C T G C G T A G C T A A C G T A C G T
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--GACCTTTGAA
CTGACCTTTG--
 A C G T A C G T A C T G G T C A G T A C A G T C A G C T A C G T A C G T A C T G C G T A G C T A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.79
Offset:-5
Orientation:reverse strand
Alignment:-----GACCTTTGAA-
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A G T A C A G T C A G C T A C G T A C G T A C T G C G T A G C T A A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:9
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:GACCTTTGAA--
--CCTTTGAWGT
 A C T G G T C A G T A C A G T C A G C T A C G T A C G T A C T G C G T A G C T A A C G T A C G T
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GACCTTTGAA----
TGGACTTTGNNCTCN
 A C G T A C T G G T C A G T A C A G T C A G C T A C G T A C G T A C T G C G T A G C T A A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T