Information for 8-AAAACACTTTADAAVH (Motif 16)

C T G A C G T A C G T A C G T A A T G C C T G A T A G C A C G T A C G T A C G T C T G A C G T A C G T A G T C A T G C A G C T A
Reverse Opposite:
C A G T A C G T A C G T A C G T G C A T A G C T C G T A G T C A C G T A A T C G A G C T A T C G C G A T A C G T A C G T A G C T
p-value:1e-10
log p-value:-2.432e+01
Information Content per bp:1.757
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif17.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets57.0 +/- 14.9bp
Average Position of motif in Background51.0 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:AAAACACTTTADAAVH-
-------TTTGAAACCG
 C T G A C G T A C G T A C G T A A T G C C T G A T A G C A C G T A C G T A C G T C T G A C G T A C G T A G T C A T G C A G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

GRHL1/MA0647.1/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAAACACTTTADAAVH
AAAACCGGTTTT-----
 A C G T C T G A C G T A C G T A C G T A A T G C C T G A T A G C A C G T A C G T A C G T C T G A C G T A C G T A G T C A T G C A G C T A
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T A C G T A C G T A C G T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAAACACTTTADAAVH
ATAAACAATTAAACA--
 A C G T C T G A C G T A C G T A C G T A A T G C C T G A T A G C A C G T A C G T A C G T C T G A C G T A C G T A G T C A T G C A G C T A
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AAAACACTTTADAAVH
----GNCTATAAAAGG
 C T G A C G T A C G T A C G T A A T G C C T G A T A G C A C G T A C G T A C G T C T G A C G T A C G T A G T C A T G C A G C T A
A C G T A C G T A C G T A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

PB0045.1_Myb_1/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AAAACACTTTADAAVH
NNNNTAACGGTTNNNAN--
 A C G T A C G T A C G T C T G A C G T A C G T A C G T A A T G C C T G A T A G C A C G T A C G T A C G T C T G A C G T A C G T A G T C A T G C A G C T A
G C T A C T G A C G T A C G T A G A C T C T G A C G T A A G T C A T C G C A T G G A C T G A C T C A G T G T A C G T A C G C T A C G A T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.53
Offset:6
Orientation:forward strand
Alignment:AAAACACTTTADAAVH
------ATTTGAATT-
 C T G A C G T A C G T A C G T A A T G C C T G A T A G C A C G T A C G T A C G T C T G A C G T A C G T A G T C A T G C A G C T A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AAAACACTTTADAAVH
NNCNNAACAATTNT-----
 A C G T A C G T A C G T C T G A C G T A C G T A C G T A A T G C C T G A T A G C A C G T A C G T A C G T C T G A C G T A C G T A G T C A T G C A G C T A
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T A C G T A C G T

PB0046.1_Mybl1_1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AAAACACTTTADAAVH
NNANTAACGGTTNNNAN--
 A C G T A C G T A C G T C T G A C G T A C G T A C G T A A T G C C T G A T A G C A C G T A C G T A C G T C T G A C G T A C G T A G T C A T G C A G C T A
G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A A C G T A C G T

TFCP2/MA0145.3/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AAAACACTTTADAAVH
AAACCGGTTT------
 C T G A C G T A C G T A C G T A A T G C C T G A T A G C A C G T A C G T A C G T C T G A C G T A C G T A G T C A T G C A G C T A
C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AAAACACTTTADAAVH
AAAAACCAATTAAGAA--
 A C G T A C G T C T G A C G T A C G T A C G T A A T G C C T G A T A G C A C G T A C G T A C G T C T G A C G T A C G T A G T C A T G C A G C T A
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A A C G T A C G T