p-value: | 1e-10 |
log p-value: | -2.465e+01 |
Information Content per bp: | 1.732 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.86% |
Number of Background Sequences with motif | 6.8 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 51.8 +/- 25.5bp |
Average Position of motif in Background | 46.4 +/- 24.2bp |
Strand Bias (log2 ratio + to - strand density) | -0.3 |
Multiplicity (# of sites on avg that occur together) | 1.29 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 1 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGACCTTACTAGTT --TGACCTYA------ |
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PH0058.1_Hoxb3/Jaspar
Match Rank: | 2 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CCTGACCTTACTAGTT--- --TGAGCTAATTAGTTGGA |
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CRE(bZIP)/Promoter/Homer
Match Rank: | 3 |
Score: | 0.55 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCTGACCTTACTAGTT CGGTGACGTCAC----- |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 4 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCTGACCTTACTAGTT -GTGACCTT------- |
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HMBOX1/MA0895.1/Jaspar
Match Rank: | 5 |
Score: | 0.53 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | CCTGACCTTACTAGTT--- ---------ACTAGTTAAC |
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PH0028.1_En1/Jaspar
Match Rank: | 6 |
Score: | 0.53 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCTGACCTTACTAGTT--- ---GNATTAATTAGTTNNC |
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RORA/MA0071.1/Jaspar
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGACCTTACTAGTT --TGACCTTGAT---- |
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PH0040.1_Hmbox1/Jaspar
Match Rank: | 8 |
Score: | 0.52 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTGACCTTACTAGTT--- --GANGTTAACTAGTTTNN |
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Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer
Match Rank: | 9 |
Score: | 0.51 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CCTGACCTTACTAGTT NAAACCGGTTNNAACCGGTT |
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Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer
Match Rank: | 10 |
Score: | 0.51 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCTGACCTTACTAGTT -RTGACGTCAYCN--- |
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