Information for 6-TCAGAAAAGAAAGCTC (Motif 13)

A G C T A G T C G C T A A C T G C G T A C G T A G T C A C G T A C T A G C G T A C G T A T C G A A C T G A G T C G A C T A G T C
Reverse Opposite:
A C T G C G T A A C T G A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A G T C C A G T A C T G C T G A
p-value:1e-10
log p-value:-2.521e+01
Information Content per bp:1.840
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.6 +/- 23.4bp
Average Position of motif in Background64.0 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TCAGAAAAGAAAGCTC
--AGAAACGAAAGT--
 A G C T A G T C G C T A A C T G C G T A C G T A G T C A C G T A C T A G C G T A C G T A T C G A A C T G A G T C G A C T A G T C
A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCAGAAAAGAAAGCTC
-CGGAAGTGAAAC---
 A G C T A G T C G C T A A C T G C G T A C G T A G T C A C G T A C T A G C G T A C G T A T C G A A C T G A G T C G A C T A G T C
A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCAGAAAAGAAAGCTC
TACTGGAAAAAAAA---
 A C G T A G C T A G T C G C T A A C T G C G T A C G T A G T C A C G T A C T A G C G T A C G T A T C G A A C T G A G T C G A C T A G T C
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCAGAAAAGAAAGCTC
GTTAAAAAAAAAAATTA
 A C G T A G C T A G T C G C T A A C T G C G T A C G T A G T C A C G T A C T A G C G T A C G T A T C G A A C T G A G T C G A C T A G T C
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

GATA2/MA0036.2/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCAGAAAAGAAAGCTC
NCAGATAAGAANNN--
 A G C T A G T C G C T A A C T G C G T A C G T A G T C A C G T A C T A G C G T A C G T A T C G A A C T G A G T C G A C T A G T C
C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TCAGAAAAGAAAGCTC
--GGAAGTGAAAST--
 A G C T A G T C G C T A A C T G C G T A C G T A G T C A C G T A C T A G C G T A C G T A T C G A A C T G A G T C G A C T A G T C
A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TCAGAAAAGAAAGCTC
----AAAACAAAGG--
 A G C T A G T C G C T A A C T G C G T A C G T A G T C A C G T A C T A G C G T A C G T A T C G A A C T G A G T C G A C T A G T C
A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TCAGAAAAGAAAGCTC
ANAGATAAGAA-----
 A G C T A G T C G C T A A C T G C G T A C G T A G T C A C G T A C T A G C G T A C G T A T C G A A C T G A G T C G A C T A G T C
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T A C G T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TCAGAAAAGAAAGCTC
--GRAASTGAAAST--
 A G C T A G T C G C T A A C T G C G T A C G T A G T C A C G T A C T A G C G T A C G T A T C G A A C T G A G T C G A C T A G T C
A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TCAGAAAAGAAAGCTC
-CAGATAAGGN-----
 A G C T A G T C G C T A A C T G C G T A C G T A G T C A C G T A C T A G C G T A C G T A T C G A A C T G A G T C G A C T A G T C
A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T A C G T A C G T A C G T A C G T