Information for 5-TGAACGGTTTGAAAAT (Motif 12)

A C G T A C T G C T G A C G T A G T A C A C T G A C T G C G A T A C G T A C G T A C T G C G T A C T G A C G T A C T G A A C G T
Reverse Opposite:
C G T A G A C T A C G T A G C T A C G T T G A C G T C A C G T A C G T A A G T C A G T C A C T G A C G T A G C T A G T C G T C A
p-value:1e-10
log p-value:-2.521e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.6 +/- 8.2bp
Average Position of motif in Background57.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:TGAACGGTTTGAAAAT
----CGGTTTCAAA--
 A C G T A C T G C T G A C G T A G T A C A C T G A C T G C G A T A C G T A C G T A C T G C G T A C T G A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGAACGGTTTGAAAAT-
GAAAAGGTGTGAAAATT
 A C G T A C T G C T G A C G T A G T A C A C T G A C T G C G A T A C G T A C G T A C T G C G T A C T G A C G T A C T G A A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

PB0046.1_Mybl1_1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGAACGGTTTGAAAAT
NNANTAACGGTTNNNAN--
 A C G T A C G T A C G T A C G T A C T G C T G A C G T A G T A C A C T G A C T G C G A T A C G T A C G T A C T G C G T A C T G A C G T A C T G A A C G T
G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A A C G T A C G T

PB0045.1_Myb_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGAACGGTTTGAAAAT
NNNNTAACGGTTNNNAN--
 A C G T A C G T A C G T A C G T A C T G C T G A C G T A G T A C A C T G A C T G C G A T A C G T A C G T A C T G C G T A C T G A C G T A C T G A A C G T
G C T A C T G A C G T A C G T A G A C T C T G A C G T A A G T C A T C G C A T G G A C T G A C T C A G T G T A C G T A C G C T A C G A T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGAACGGTTTGAAAAT
---AAGGTGTGAAAAT
 A C G T A C T G C T G A C G T A G T A C A C T G A C T G C G A T A C G T A C G T A C T G C G T A C T G A C G T A C T G A A C G T
A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX21/MA0690.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TGAACGGTTTGAAAAT
---AAGGTGTGAA---
 A C G T A C T G C T G A C G T A G T A C A C T G A C T G C G A T A C G T A C G T A C T G C G T A C T G A C G T A C T G A A C G T
A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TGAACGGTTTGAAAAT
----AGGTGTGAAA--
 A C G T A C T G C T G A C G T A G T A C A C T G A C T G C G A T A C G T A C G T A C T G C G T A C T G A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TGAACGGTTTGAAAAT
---AAGGTGTGAAA--
 A C G T A C T G C T G A C G T A G T A C A C T G A C T G C G A T A C G T A C G T A C T G C G T A C T G A C G T A C T G A A C G T
A C G T A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TGAACGGTTTGAAAAT
---TAGGTGTGAAG--
 A C G T A C T G C T G A C G T A G T A C A C T G A C T G C G A T A C G T A C G T A C T G C G T A C T G A C G T A C T G A A C G T
A C G T A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TGAACGGTTTGAAAAT
------ATTTGAATT-
 A C G T A C T G C T G A C G T A G T A C A C T G A C T G C G A T A C G T A C G T A C T G C G T A C T G A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T